Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03355 ATGGGTGGTAAGGAAAATGCCATGGAGTTTCAACATGGAAATGAGAACATTATTATGAATAGTTCTTGTCCATCTTCAGAAATGGATATTAGTTCTGTGTCCAATATGGGTAAGCCTTCTTCAGATGCACCTAATCAGCATCATCATCATTTCCTTTCTTCTTCAGCTTGGGATAATCCACTTGTTTCTTTGAGTCAAGCTCATACTTTTGGAGGCTCTTCAATGGTTTCTCACAATGAATTTGCAAATGCTAATTCAACTTACCCTCTTGTTTTGGAGAATCACCAATCTCACCACCTTGTTCAATACATGTCTGACTCAAATCTTGGTGGCATGATCCACAAGGTTCCTTCATATGGAAGTGGAAGTTTCTCTGAAATGGTTGGTTCCTTTAGCCAACATGGTTCTGGTGGGGATCATGTTACTAACACATCAGGGTATTCAATTCCACCACAACAACATTATAACCCTATCAAGGATGCTGGAACCCAAAGGGGTTCAATTAATGGTGAGCAATCTCAAGTTGAGGACTCAATTCACGAGGATGGAGGTACAGGATCTGCACCTAGTGCAAATAGAAGAAAAAGAGGACTTGATCAAAATTCTACTTTCAGTCCAAACAAGAATGCTGAGGGTGATGGGGTGAAAGATTCTCCAAGGAAGATCTCTGATGGTCCAAAAGAAAATGAAAAGAAACCAAAAGTTGAGCAATTGGGGAAACAAGTTAAAGAGAACTCTCAGAGTGGAGGAGATGCTTCAAAAGATAATTTCATTCATGTGAGAGCTAGAAGAGGTCAAGCAACCAACAGCCACAGCCTTGCAGAAAGGGTTAGAAGAGAAAAGATTAGTGAAAGAATGAGGTTGCTTCAAGAACTTGTTCCAGGATGCAACAAGATAACTGGCAAAGCAGTGATGCTAGATGAGATAATAAACTATGTGCAATCACTGCAACAACAGGTTGAGTTTTTGTCCATGAAACTTGCCACGGTGAACCCTGAACTGAACTTTGACGTAGAACGGATCTTATCTAAGGATGTAAGTGAAGGTCTTAATCGTATGGATTTGACTCTTTGTAAATGA 1080 0.4 MGGKENAMEFQHGNENIIMNSSCPSSEMDISSVSNMGKPSSDAPNQHHHHFLSSSAWDNPLVSLSQAHTFGGSSMVSHNEFANANSTYPLVLENHQSHHLVQYMSDSNLGGMIHKVPSYGSGSFSEMVGSFSQHGSGGDHVTNTSGYSIPPQQHYNPIKDAGTQRGSINGEQSQVEDSIHEDGGTGSAPSANRRKRGLDQNSTFSPNKNAEGDGVKDSPRKISDGPKENEKKPKVEQLGKQVKENSQSGGDASKDNFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDVERILSKDVSEGLNRMDLTLCK 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03355 359 MobiDBLite consensus disorder prediction 213 239 - -
Car04g03355 359 MobiDBLite consensus disorder prediction 130 174 - -
Car04g03355 359 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 266 316 IPR011598 GO:0046983
Car04g03355 359 Gene3D - 263 337 IPR036638 GO:0046983
Car04g03355 359 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 14 346 IPR024097 GO:0006355
Car04g03355 359 CDD bHLH_AtBPE_like 256 341 - -
Car04g03355 359 SMART finulus 272 322 IPR011598 GO:0046983
Car04g03355 359 MobiDBLite consensus disorder prediction 194 209 - -
Car04g03355 359 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 264 334 IPR036638 GO:0046983
Car04g03355 359 MobiDBLite consensus disorder prediction 28 51 - -
Car04g03355 359 Pfam Helix-loop-helix DNA-binding domain 269 317 IPR011598 GO:0046983
Car04g03355 359 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 14 346 - -
Car04g03355 359 MobiDBLite consensus disorder prediction 130 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03355 Car-Chr4 62010811 62015195 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03355 1 357 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 41.322 2.13e-59 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car04g03355 HLH 3.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03355 - - gmx:100794464 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03355 04 62010811 62015195 Car04g03355 04 62010811 62015195 ECH