Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03354 ATGTTGGAAAGGATCTCAGCTTCTTTTACAGATCGAAAGCGTCGACGCAATGCCAAACCGCATCATCAAAATCCCGTTCCTGATACGAAACGCGACGCCGTAGAAGGCGGTTTTGACGGATCTTCTTTCACCGGCGCCGTATTCAACCTCTCGACGACAATTGTCGGTGCCGGCATTATGGCTCTTCCGGCTGCCGTGAAACAACTCGGGTTGATTCCCGGTTTGGTGATGATTATTCTGTGTGGTGCGTTAACAGAATCATCCGTTGTGATGCTGTTGAGATTCACACGTGCGTCGAAATCGTCAACGTATTCCGGTGTTGTTCGTGATGCGTTCGGTGGCATTGGTCGCTTCATTTTATTGATTTGTATCATCTTCAACAACATGGGAATGCTAATTGTGTACATGGTCATTATCGGTGATGTGTTCTCGGGAACGTGGTCAAAAGGAGTCCACTATTCAGGAGTTTTAGAAGAATGGTTTGGTCAACGCTGGTGGTCAACGCGCCCTGTGTTGTTGTTTCTGACAACACTTTTTGTCTTTCTGCCTCTGGCATCCTTCAGGCGTGTGGATTCACTGAGATACTCGTCAGCATTATCAGTTGTGTTGGCTATTGTTTTTGTGGTGATAACAGCTGGTGTTGCAATTGTTAAGTTTATTGATGGAAGCATTGAGATGCCACACTTAATGCCTCAATTCACTGGCCAACAATCCTTTTGGAAGCTTTTCACTACTATCCCTATATTAGTCACTGCTTACATCTGTCATCATAACGTTCATCCTATAGAGAATGAACTAAAAGATCCTTCCCATATGAATGCAATAGTTAAGACATCACTCTTACTATGCTCATCTGTATACATAGCAACAAGCCTTTTTGGAGTTTTATTATTTGGAGACAAAGTACAAGATGATGTACTAGCCAATTTTGATGGAGATCTTGGAGTTCCTTATGGTTCATTTCTTAATGATGTAGTTAGAGTGAGCTATGGAATTCACCTTATCTTAGTCTTCCCAATTGTGTTTTTCTCACTTCGTCTCAACTTAGATGGTCTTTTGTTTCCACATGCCATTCCTCTTTCTTTTGACAACAAAAGATTCTGTTTTGTCACCACAATTCTATTGGCTTTTGTTTTTGTTGGAGCTAATTATGTTCCTAGTATTTGGGATGCCTTTCAATTCACAGGTGCTACAACTGCCATATCTGTTGGATACATTTTTCCAGCTGCTATTGCTCTTAGGGACACTCGTGGGGTTGCAACAAAAAAAGACAAGATGTTATCTTTGTTTATTATACTCTTGGCTGTCTCATGTAGCACTGTAGCCTTATCTAGTGACTTGTACAGCATCTACAATAACGAAACAACATTAGATGAAGACCCATTATTATCATGA 1395 0.4136 MLERISASFTDRKRRRNAKPHHQNPVPDTKRDAVEGGFDGSSFTGAVFNLSTTIVGAGIMALPAAVKQLGLIPGLVMIILCGALTESSVVMLLRFTRASKSSTYSGVVRDAFGGIGRFILLICIIFNNMGMLIVYMVIIGDVFSGTWSKGVHYSGVLEEWFGQRWWSTRPVLLFLTTLFVFLPLASFRRVDSLRYSSALSVVLAIVFVVITAGVAIVKFIDGSIEMPHLMPQFTGQQSFWKLFTTIPILVTAYICHHNVHPIENELKDPSHMNAIVKTSLLLCSSVYIATSLFGVLLFGDKVQDDVLANFDGDLGVPYGSFLNDVVRVSYGIHLILVFPIVFFSLRLNLDGLLFPHAIPLSFDNKRFCFVTTILLAFVFVGANYVPSIWDAFQFTGATTAISVGYIFPAAIALRDTRGVATKKDKMLSLFIILLAVSCSTVALSSDLYSIYNNETTLDEDPLLS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03354 464 MobiDBLite consensus disorder prediction 1 32 - -
Car04g03354 464 Pfam Transmembrane amino acid transporter protein 40 441 IPR013057 -
Car04g03354 464 PANTHER AMINO ACID TRANSPORTER AVT6A 17 455 - -
Car04g03354 464 PANTHER AMINO ACID TRANSPORTER 17 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03354 Car-Chr4 62006440 62010250 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03354 15 454 Amino Acid or Auxin Permease AAAP Family AT3G30390 54.607 1.09e-178 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03354 K14207 - gmx:100814034 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03354 04 62006440 62010250 Car04g03354 04 62006440 62010250 ECH