Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03328 ATGGGTATCTGCATATCCGTTGCATCTTCAGAGATTCATGGAATCCCTCAAGTTCATGATGAAAATGTCATGATATTTGAAGCAAACAAGGTCCAACATGAGACTCATAGACTTTGCTCTGTTTACTCTAAAAAAGGTACTAAAGGTCTCAACCAAGATGCTGCCTCTCTTTATCAGGGTTATGAGATGGAAGATGGAGCATTTTGTGGTGTTTATGATGGACATGGAAGGAATGGACACATAGTGAGCAAGTTAGTGAATAGTAATTTGTCTTCTCTCATATTAAGCCAAAAGAATGGTTTTGAGGAGATTGATACACAAACAAATATTGTGGACTACAAACAAAACCATTTTCCAAAGAACTTTCTAAAATGGAAAGAAGCCATTCTTGGTGCTTTTAAGGTGATGGACAAGGAGGTGAAGCTACAAGAGAATATAGATTGTTCTTGCAGTGGAACTACTGCTGTAGTTGTCATAAGACAGGGTAAAGGTCTCATCATAGCTAATCTTGGTGATTCAAGAGCAATCTTAGGGACAATCCATAATGCAAAACTGGAAGCTATTCAATTGACTACTGATTTGAAGCCTGGATTGCCTTGTGAAGCAGAGAGAATAAGGAATTGCAACGGTTGCGTATATGCGCTAAAGGAAGAACCACATGTCCAACGAGTATGGTTGCCCAACGAAACCTACCCTGGCCTAGCCATGTCTAGAGCTTTTGGAGATTTCATACTCAAAGACCATGGTGTTATTTCCATCCCAGATGTTTGCTATCACCCTTTAACATCAAGTGACCAATTTGTTGTTCTTGCAAGTGATGGGGTGTGGGATGTACTAAGTAATGATGAGGTTGCATCAATTGTGTGGAAGGTAGAAAGTGAAGAGGCAGCTGCAAAGGCAGTGGTGGCAGCAGCCACAGCTGCATGGGCAAACAAGTATCCTTCTTCTAGGGTAGATGACTGCACTGTTGTTTGCCTTTTCCTACAGAAGAAACCACAAAACTTGGGGCATATGAAAAGTGGAAAATTAGGTTAA 1035 0.4068 MGICISVASSEIHGIPQVHDENVMIFEANKVQHETHRLCSVYSKKGTKGLNQDAASLYQGYEMEDGAFCGVYDGHGRNGHIVSKLVNSNLSSLILSQKNGFEEIDTQTNIVDYKQNHFPKNFLKWKEAILGAFKVMDKEVKLQENIDCSCSGTTAVVVIRQGKGLIIANLGDSRAILGTIHNAKLEAIQLTTDLKPGLPCEAERIRNCNGCVYALKEEPHVQRVWLPNETYPGLAMSRAFGDFILKDHGVISIPDVCYHPLTSSDQFVVLASDGVWDVLSNDEVASIVWKVESEEAAAKAVVAAATAAWANKYPSSRVDDCTVVCLFLQKKPQNLGHMKSGKLG 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03328 344 ProSiteProfiles PPM-type phosphatase domain profile. 38 328 IPR001932 -
Car04g03328 344 CDD PP2Cc 37 328 IPR001932 -
Car04g03328 344 Pfam Protein phosphatase 2C 64 311 IPR001932 -
Car04g03328 344 Gene3D - 19 331 IPR036457 -
Car04g03328 344 SMART PP2C_4 29 326 IPR001932 -
Car04g03328 344 PANTHER ALPHABET, ISOFORM E-RELATED 1 333 - -
Car04g03328 344 SUPERFAMILY PP2C-like 34 329 IPR036457 -
Car04g03328 344 PANTHER PROTEIN PHOSPHATASE 2C 72-RELATED 1 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03328 Car-Chr4 61726582 61730575 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03328 1 333 PP2C-type Phosphatase Gene Family AT5G26010 52.059 6.80e-109 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03328 - - aip:107605550 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03328 04 61726582 61730575 Car04g03328 04 61726582 61730575 ECH