Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03322 ATGGAGAATGATGTGTATAATGCTCCAATGAACATTTCTGGCCAAATTTCTAATGTCATTGAAGATATCACACATCATCTCACACAAAAGCCACTCATTCATTGCTATTCATTTGACCTTAATAACCAAAACAACATCATAAATGGTATTCCAATACTTTCAAGTGGAGAGCAAGATCAACATGATGTAAGTAATGGGCATGTTGATGCTGTTAGCTTCATAAATCATGCTACTATTGCTGATTCTAGTTCATTTGTTACATCACACGGAAGAACTATTGTAGGAGATGCTTCAAATCTCATTGTTAATAGTGAATTTCAAAGGCCAATTCATTCTGTTTCAATTCCTGCTAGAATTGGTCTTCAAGAGAATTTAGAAGCTTTAGGGACATACATGTTCAATAATTGGCATGATAACTCAAACTCAAACCCTTTGTGTTCATCTTTTGGTGATGGAAATGGATTCATGCCGTCATATTCATCGATACCGAACATTGATCCGAATGGATGGCAATCATCTAATGTTGCAAACTTAACAAATCTTGCTTATAGTTCCTCTAATTGTAGCAATGAGCTTTCACTAAGTCTTGCAACATCTCCAACTTCAGGTCAGTGTTCTGAGATTAGTTGCTCTGATTTAACACATAGCATGAATGGAACAACAAGATCAGGTTTGGAACAACCCTCATGCAGTAGTATGGAACTTTCAATGAGTTTAGGGTCTGATAAACATGTTAGATTTTCGCCTGCCATTTTAGGATCAAGATACCTTGCTGTGATTCAAGAAATACTTGTTCAAATTGCAACATATTCATTTGAAAATCTTGATGAGATTAATTATTCGGCTTCTGGTGTTAGAGGACGGGGAAATAAATCAACTTCTTATTCCACAACGAAGCGAAGGATAGGAATGAATCACGACACGAGTTCTATGTCAGAAGAAGCTTATGCAGATTCTTCATTGCAAAGGCATACTTCTGAATCAAAGAAATCTCAACTGCTGATGCTTCTACAGCTGGTGGATAATCAATATAGTCAGTGTTTGGATGAGATTCACACTGTCGTATCTGCATTTCATGCTGCTACTGAGCTTGATCCACAAATACATGCGCATTTCGCTGTCAAAACGGTTTCTCTCTTATATAAGGACTTGAGAGAGAGGATTAGCAATCATATTCTTGCCATGGGATCGAATTTTAACAGCTCATGGTCAGAAGAGGATAAGGAACTGTCTGTTGAAACTTCATTCATTCAAAAGCAATGGGCTCTCCAACAGCTGAAAAAGAAAGACCAGCTATGGAGGCCTCAAAGGGGCTTGCCAGAAAGATCTGTTTCGGTTCTACGCGATTGGATGTTTCAGAATTTCCTCCATCCGTATCCTAAAGATGCAGAGAAGCATTTACTTGCAATAAAAAGTGGATTGACTAGAAGCCAGGTATCCAACTGGTTTATAAATGCGCGTGTTCGGCTATGGAAACCATTGATTGAGGAAATGTATGCTGAAATGAATAGAAGAAAAGTTTGTCGAAACGAAGGGGAAAATGAGAGTAGTGAAAGAAGTAGGATAAGCATGAACAATCAAATGTTTAATATCAATTGA 1599 0.3759 MENDVYNAPMNISGQISNVIEDITHHLTQKPLIHCYSFDLNNQNNIINGIPILSSGEQDQHDVSNGHVDAVSFINHATIADSSSFVTSHGRTIVGDASNLIVNSEFQRPIHSVSIPARIGLQENLEALGTYMFNNWHDNSNSNPLCSSFGDGNGFMPSYSSIPNIDPNGWQSSNVANLTNLAYSSSNCSNELSLSLATSPTSGQCSEISCSDLTHSMNGTTRSGLEQPSCSSMELSMSLGSDKHVRFSPAILGSRYLAVIQEILVQIATYSFENLDEINYSASGVRGRGNKSTSYSTTKRRIGMNHDTSSMSEEAYADSSLQRHTSESKKSQLLMLLQLVDNQYSQCLDEIHTVVSAFHAATELDPQIHAHFAVKTVSLLYKDLRERISNHILAMGSNFNSSWSEEDKELSVETSFIQKQWALQQLKKKDQLWRPQRGLPERSVSVLRDWMFQNFLHPYPKDAEKHLLAIKSGLTRSQVSNWFINARVRLWKPLIEEMYAEMNRRKVCRNEGENESSERSRISMNNQMFNIN 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03322 532 PANTHER HOMEOBOX PROTEIN ATH1 134 529 - -
Car04g03322 532 SUPERFAMILY Homeodomain-like 435 501 IPR009057 -
Car04g03322 532 MobiDBLite consensus disorder prediction 510 532 - -
Car04g03322 532 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 134 529 - -
Car04g03322 532 CDD homeodomain 433 493 IPR001356 GO:0003677
Car04g03322 532 Pfam Associated with HOX 251 389 IPR006563 -
Car04g03322 532 SMART HOX_1 433 497 IPR001356 GO:0003677
Car04g03322 532 Pfam Homeobox KN domain 450 489 IPR008422 GO:0003677|GO:0006355
Car04g03322 532 Gene3D - 436 515 - -
Car04g03322 532 SMART prehox3 245 390 IPR006563 -
Car04g03322 532 ProSiteProfiles 'Homeobox' domain profile. 430 493 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03322 Car-Chr4 61681562 61684167 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03322 190 507 Homeobox Transcription Factor Family AT4G32980 56.426 7.66e-110 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Car04g03322 POX 2.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03322 - - gmx:100812648 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03322 04 61681562 61684167 Car04g03322 04 61681562 61684167 ECH