Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03304 ATGGCAGAAACtgcagtgtggtttgttctaaggcaagtgtaccaactcctgaaagaggaacaaacactactcaaagatgtaagcagaGACTTAGAACACATAAAAAATGAACTCGAATTCATTCGTGCCTTCTTAAAAGACGCAGATCAAAGAGCCACGTCAGATACCGAATTAGAAATCAAAGCTTGGGTGAAGCAATTGAGAGAATTATCATTTCGCATAGAAGATGTCGTCGATCAATACATCATGGATGTGTCTCAAcatcatcatcatcatcatcatcatcatGGTGGATACATAGCTAAACTCCAAAACCTTGCTGGTTTAATCAAATTGAAAACCATAAAACCTCGTCATCGAGTAGCGTGTGAGATTCAAGATATCAAATTGTCATTTCATGAAATCAAAGAAAGATCTAAAAGATACAATTTACTTTCCTCACTTGGACCACAAGGATCAATTACGAAAGATGTTGTGGCGAAGTCACGTGATCCTGATCGATTGGCTTCACTTTTTATTGAAGAAGATGAACTTGTTGGATTTGAGAAACCTAGGGATGAAATTGTTGGTTGGTTGGTGGATGGAGAAGTGATAGATCGTAGtgtgatttcagtagttggaatggggggacttgggaaaaccactcttgctaaaaatgtttttgataatccccaagtgaaaggacactttgatTGTCGTGCATTTCTTGTAGTTTCTCAATCTTATAATGTTGAAGCTTTGTTGAGAAACATGATGATGCAATTTTCTGAAGAAACTAAAGAACCTCTTCCTCGAGGTACAAACACGATGGACAAGATGCAACTCATTACTCTGGCAAGGTCTTACTTGCAGAGCAAAAGGTACGTAATTTGCTTCGATGACGTATGGACAATAAATTTTTGGGATGAAATCCAACTTGCCACACCTGATAACAAGAAAGGGAGTAGGATAATGATCACAACCAGGAATTTGGATGTTTCCAACTATTGTAGGAAAGATTCTTGTGTTCAAATGCACAAGTTGCAATCCTTGCCTCCAAACAAAGCATGGGAACTCTTTTGCAACAAGGCATTTCGATTTGATTTCTATGGAAATTGTCCACCAGAGCTCAAAGATATATCTGAAGAAATCGTTCAAAAATGCGAGGGGTTGCCGCTTGCAATTGTTGCTGTAGGAGGTCTCTTGTCAACTAAAGATAAAACTGTTTCTGAATGGAAAAAACTATGCCAAAATCTAAGTTTGGAGTTAGACCGTAATCCTCATTTAGCTAACTTACCAAGAATTTTAGGCCTTAGTTATGAGGACTTGCCACATCATTTGAAATCATGTATGTTGTATTTTGGTATATACCCAGAAGATTACTCAATTAGGAGTTCAAGGTTGATCCGACAATGGATAGCCGAGGGGTTTGTTAAACACGAAGTAGGGAAATCTTTGGAGGAAGTTGGAGAAGAATACTTGATAGAGTTGATCCATAGAAGTTTGGTTCATGTCTCCCGTGTTCACTATGATGGTAAAGCTACAAGCTGTCGAATCCATGATTTGTTACGAGAAATGATCATGAGAAAAATGAAGGATTTAAGTTTTTGTCATGTTGTCCGTGAAGATAATCAGGAACACATCTCTGATGTAATTGTAACGATCAGGCGATTGGCTGTAGAAACCAGTTCCAGCAATGTGCTAAGGAGCATTGAACACTTCCCTATACGATCCCTATATATATTCAATGCTTTTATAAACTTTCCTGATTACTTTGGGAGTAAGATCTTTGCAAAGTCTAAGCTTTTGAAAGTATTGGACTTGGAAGGTGCTTGGTTGAACTATGTTCCTGATGAAATTGGAAATCTTTTTCACTTAAAGTACTTGAGCTTAAGATATACAAATGTCAAGAATCTTCCTAAGTCCATTGGCAAACTACAAAATCTAGAGACCTTGGACCTAAAGGAAACACTAGTGTGCGAATTACCAAGTGAAATAAATAGGCTTTTAAAGTTGCGCCATCTTCTAGTTTACTGCAGAAAAACATATTCTAGTATCAGTGGTGAAAGTGGGGTGAAAATGATGGAAGGTGTTGGAGGCATGACAGTTTTGCAGAAACTTTATCATATAGAGGTAAACCATGGTGGGTTGAACCTAATAGCAGAGTTAAGAAAGCTGAGGCAATTAAGGAAGTTGGGACTAAAGAATGTAAAGAGAGAATATGGAAATGCTCTTTGTGATTCAATAAAGGAAATGAATTGCCTTGAATCTCTTCATGTTAGTGCAATAAATGAACATGAAATCATAGACTTGCAATTCATTTCATCTCTCCCTCAACTTAGACAACTTCACTTGTTTGGTCGATTAGAAAAGCTTCCTAATTGGATTTCAAGACTTGATCATCTTGTTAGGTTGTCAATTCGATTTTCCAAGTTAAAGGATGATCCACTCAAGTTACTTAAAGATTTGCCAAACTTGTTGCGTCTTGCGATTGTCTGTGATGCTTATGATGGAGAAATGTTGCACTTCCAAGTTGGGTTTAAGAAGCTGAACAACCTATATCTTGTGCAGTTGAATAACTTGAATTCAATTTTAATTGACAATGGAGCTTGTCCTGCCATTAAACTAATTGAAATGGTGCATATCCCCAAACTAAAAGAGATTCCCACTGATATTCATCTGCTAAAGAGCCTTGAAACTTTGTATTTCATTGATATGCCTTATGAGTTTAATCAAAGCATTGATCCAAATGGTGGACCCAAAAACTGGGTCATCCAACATGTTCAAAAGGTAACTGTTATAGTGAAGGTTGGTTCAACAAATTCTTTTGACTACAACTATCGCACTATTTGTCATACAAGGGGTACATGA 2850 0.3467 MAETAVWFVLRQVYQLLKEEQTLLKDVSRDLEHIKNELEFIRAFLKDADQRATSDTELEIKAWVKQLRELSFRIEDVVDQYIMDVSQHHHHHHHHHGGYIAKLQNLAGLIKLKTIKPRHRVACEIQDIKLSFHEIKERSKRYNLLSSLGPQGSITKDVVAKSRDPDRLASLFIEEDELVGFEKPRDEIVGWLVDGEVIDRSVISVVGMGGLGKTTLAKNVFDNPQVKGHFDCRAFLVVSQSYNVEALLRNMMMQFSEETKEPLPRGTNTMDKMQLITLARSYLQSKRYVICFDDVWTINFWDEIQLATPDNKKGSRIMITTRNLDVSNYCRKDSCVQMHKLQSLPPNKAWELFCNKAFRFDFYGNCPPELKDISEEIVQKCEGLPLAIVAVGGLLSTKDKTVSEWKKLCQNLSLELDRNPHLANLPRILGLSYEDLPHHLKSCMLYFGIYPEDYSIRSSRLIRQWIAEGFVKHEVGKSLEEVGEEYLIELIHRSLVHVSRVHYDGKATSCRIHDLLREMIMRKMKDLSFCHVVREDNQEHISDVIVTIRRLAVETSSSNVLRSIEHFPIRSLYIFNAFINFPDYFGSKIFAKSKLLKVLDLEGAWLNYVPDEIGNLFHLKYLSLRYTNVKNLPKSIGKLQNLETLDLKETLVCELPSEINRLLKLRHLLVYCRKTYSSISGESGVKMMEGVGGMTVLQKLYHIEVNHGGLNLIAELRKLRQLRKLGLKNVKREYGNALCDSIKEMNCLESLHVSAINEHEIIDLQFISSLPQLRQLHLFGRLEKLPNWISRLDHLVRLSIRFSKLKDDPLKLLKDLPNLLRLAIVCDAYDGEMLHFQVGFKKLNNLYLVQLNNLNSILIDNGACPAIKLIEMVHIPKLKEIPTDIHLLKSLETLYFIDMPYEFNQSIDPNGGPKNWVIQHVQKVTVIVKVGSTNSFDYNYRTICHTRGT 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03304 949 Coils Coil 17 37 - -
Car04g03304 949 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 447 IPR027417 -
Car04g03304 949 Gene3D - 4 122 - -
Car04g03304 949 Pfam NB-ARC domain 182 435 IPR002182 GO:0043531
Car04g03304 949 PANTHER DISEASE RESISTANCE PROTEIN RP 30 905 IPR044974 GO:0006952
Car04g03304 949 Gene3D - 166 337 IPR027417 -
Car04g03304 949 Gene3D - 433 524 IPR036388 -
Car04g03304 949 Gene3D Ribonuclease Inhibitor 570 909 IPR032675 -
Car04g03304 949 Gene3D - 343 432 IPR042197 -
Car04g03304 949 PRINTS Disease resistance protein signature 202 217 - -
Car04g03304 949 PRINTS Disease resistance protein signature 282 296 - -
Car04g03304 949 PRINTS Disease resistance protein signature 381 395 - -
Car04g03304 949 PRINTS Disease resistance protein signature 637 653 - -
Car04g03304 949 SUPERFAMILY L domain-like 513 917 - -
Car04g03304 949 PANTHER - 30 905 - -
Car04g03304 949 CDD RX-CC_like 2 137 IPR038005 -
Car04g03304 949 Pfam Rx N-terminal domain 6 94 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03304 Car-Chr4 61566047 61571831 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03304 192 670 WRKY Transcription Factor Family AT5G45050 23.301 2.44e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03304 K13457 - gmx:100801561 939.102