LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car04g03302	ATGACAAACTCGAGCTGCGAATTCAGTGAGTCAGAGCTATGTCGCGACGAGTCAACGGCGTTTATTCTAAAATTCGTTGCGATGGCTTCGATTCTAGTAGCGGGATTTACGGGAATCGCGATACCGCTGTTCGGAAAACGGCGGCGGTTATTTCATCCCGACGGAGAGTTTTTACCGGCGGCTAAGGCTTTTGCGGCTGGTGTGATACTAGCGACGGGATTCGTTCACATGCTTAATGACGCGTGGGAAGCACTTAACCATCCTTGTTTGAAATCACATTCGCACGTGTGGTCGAAGTTTCCTTTTACTGGGTTTTTCGCTATGATGTCAGCTTTGTTTACTCTTTTAGTTGACTTTGTTGCAACGCAGTATTACGAGGGAAGACAGAGGGCGACACGTGGCGGAACTGAACATAAGGTTAATCAATTGGAGGGTGGCGATGATGATTTGGAGGAAGAGTTATTGGGATCGGGAATCGTTGATGGAATGCATATTGTGGGGATGCATGCTCATGCGTCGCACCATACACATTCTCACCCGCGGCAGGATAATGATCAAATACAACATGGGCATCATGAACACGCGCACTCTCAATCGCACGATGATGACGACGTGGAAGGTAGCGTTCGCCATGTCGTTGTTTCGCAGGTATTGGAACTTGGCATAGTTTCACATTCCATGATAATTGGGCTATCACTAGGAGTCTCACAAAGCCCATGTACAATGAGACCCTTAATTGCAGCATTATCCTTCCACCAATTCTTTGAAGGGTTTGCACTTGGTGGTTGCATCTCTGAAGCCCAATTCAAAACTTCATCAACAACAATAATGGCTTGTTTTTTTGCACTTACAACACCATTAGGTGTTGCAATTGGGACATGTATTTCATCAAATTTTAACCCTTATAGTCCAGGAGCTCTTGTCACAGAAGGCATATTGGACTCTTTTTCAGCTGGAATTTTAGTGTATATGGCTTTGGTGGATTTAATAGCTGCTGATTTTCTTAGTAAGAGAATGCGTTGTAACTTTAGGCTTCAAATTGTATCTTATTGTTTGCTTTTTCTTGGGGCTGGCTCTATGTCCTCTCTTGCACTTTGGGCCTAA	1104	0.4466	MTNSSCEFSESELCRDESTAFILKFVAMASILVAGFTGIAIPLFGKRRRLFHPDGEFLPAAKAFAAGVILATGFVHMLNDAWEALNHPCLKSHSHVWSKFPFTGFFAMMSALFTLLVDFVATQYYEGRQRATRGGTEHKVNQLEGGDDDLEEELLGSGIVDGMHIVGMHAHASHHTHSHPRQDNDQIQHGHHEHAHSQSHDDDDVEGSVRHVVVSQVLELGIVSHSMIIGLSLGVSQSPCTMRPLIAALSFHQFFEGFALGGCISEAQFKTSSTTIMACFFALTTPLGVAIGTCISSNFNPYSPGALVTEGILDSFSAGILVYMALVDLIAADFLSKRMRCNFRLQIVSYCLLFLGAGSMSSLALWA	367

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Car04g03302	367	MobiDBLite	consensus disorder prediction	177	205	-	-
Car04g03302	367	TIGRFAM	zip: ZIP zinc/iron transport family	6	367	IPR004698	GO:0005385\|GO:0016021\|GO:0071577
Car04g03302	367	PANTHER	ZINC/IRON TRANSPORTER	1	367	-	-
Car04g03302	367	PANTHER	ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN	1	367	-	-
Car04g03302	367	MobiDBLite	consensus disorder prediction	171	205	-	-
Car04g03302	367	Pfam	ZIP Zinc transporter	21	364	IPR003689	GO:0016020\|GO:0030001\|GO:0046873\|GO:0055085

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Car04g03302	Car-Chr4	61530141	61532919	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Car04g03302	2	367	Inorganic Solute Cotransporters	AT1G10970	64.247	2.68e-154	437

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car04g03302	K14709		-	gmx:100812212	480.715

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Car04g03302	04	61530141	61532919	Car05g02834	05	73392778	73395193	PCT

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