Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03294 ATGAATTCACAGTTACTCCTTTACGCAAATGCAACACCAACACCAACACACACTCTTCACTCTCACTCTCATTATTCCTTCTTCCGCAAAACAAAAACCCCAATTCGTATCAGATGCTGcaccaccaccaccaccaccaccaccaccaccaTAGACATCGAAATGGTcaaaaccaaacaaggaacctacgaaccaaaacaaaacaaaGTCGTCGTACTATGGGACCTCGACAACAAACCACCACGTGGTCCACCTTACGAAGCCGCACTCTCTCTCAAAACCCTAGCTGAACGTTTCGGCCAACTCACCGACTTCTCCGCTTACGCCAACCGCCACGCCTTCATCCACCTTCCTCAATGGGTCCTCAACCAACGCCGCGAACGCAAAAACCTCGACATCCTCGAACGCAAAGGAATCATCAATCCCTCCGAACTCTACGTCTGCACCGTCTGCGGCCGAAAATGCAAAACCAATTTAGATCTCAAAAAACACTTCAAACAGCTTCACCAACGCGAGCGTCAGAAGAAGCTTAACCGTTTGAATTCGTTGAAAGGAAAGAAGCGTCAGAAGTATAAAGAACGCTTTGTTAGTGGGGACCACAAGTATAACGATGCGGTTAGGAGGATTGTTACTCCCAAAGTTGGTTACGGTTTAGCTTCGGAGTTGCGGCGTGCCGGTGTTTTTGTTAAGACTGTTGAGGATAAACCTCAGGCTGCTGATTGGGCTTTGAAGAAACAGATTATGCATTCTATGACTAGAGGCATTGATTGGTTGTTTTTGGTTTCGGATGATTCTGATTTTAGCGATATGTTGAGGAGGGCGAGGGAGGCTAATTTAGGGACTGTTGTTGTTGGAGATGTTGATAGAGTTTTGGGGAGAGATGCTGATTTGTGGGTTCCTTGGACTGCTGTTGAGAATGGTGAGGTTATGGATATGGATTTGGTTCCCAAGAGTAGAGGGAGGAGAAGGAATTCCACGGGGACCACTACCACCACCACAATGAATGATTTTGGTGATGTGTTGTTTTTTCATGGGGGTGAGGAAATGGAAGAAGATTTTATGTTGGAGTATAGCGAGGATGAGGATTTTGATGATGACGAGTACACATCGGATGAAGAAGAAGAAGATGATGGATTTTATATTTATTGA 1149 0.4256 MNSQLLLYANATPTPTHTLHSHSHYSFFRKTKTPIRIRCCTTTTTTTTTTIDIEMVKTKQGTYEPKQNKVVVLWDLDNKPPRGPPYEAALSLKTLAERFGQLTDFSAYANRHAFIHLPQWVLNQRRERKNLDILERKGIINPSELYVCTVCGRKCKTNLDLKKHFKQLHQRERQKKLNRLNSLKGKKRQKYKERFVSGDHKYNDAVRRIVTPKVGYGLASELRRAGVFVKTVEDKPQAADWALKKQIMHSMTRGIDWLFLVSDDSDFSDMLRRAREANLGTVVVGDVDRVLGRDADLWVPWTAVENGEVMDMDLVPKSRGRRRNSTGTTTTTTMNDFGDVLFFHGGEEMEEDFMLEYSEDEDFDDDEYTSDEEEEDDGFYIY 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03294 382 ProSiteProfiles Zinc finger C2H2 type domain profile. 146 174 IPR013087 -
Car04g03294 382 SMART c2h2final6 146 169 IPR013087 -
Car04g03294 382 Coils Coil 166 186 - -
Car04g03294 382 ProSitePatterns Zinc finger C2H2 type domain signature. 148 169 IPR013087 -
Car04g03294 382 MobiDBLite consensus disorder prediction 354 382 - -
Car04g03294 382 CDD PIN_LabA-like 156 286 - -
Car04g03294 382 PANTHER - 13 370 - -
Car04g03294 382 PANTHER OS06G0166200 PROTEIN 13 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03294 Car-Chr4 61448314 61449754 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03294 5 381 C2H2 Transcription Factor Family AT5G52010 55.388 6.61e-158 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car04g03294 None None None