Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03276 ATGGGGTGGGGTCACCTTGGAAAACATGGCTCAGATTCCGGTAACGACGGCGATGCAGGTCCCAGCACCAGCACGGCGGAACCACGGCAGTTTCCTTCTGCGGCTCAGCCGGAAATGATGCGAGCTGCTGAGAAAGACGATCAGTATGCCTCTTTCGTTTACGAAGCCTGTCGCGACGCCTTCCGCCAACTCTTCGGTACTAGAGTTGCGGTGGCTTATCAAAACGAGACGAAACTTTTAGGGCAAATGCTTTACTATCTGCTCACAACAGGCTCGGGACAACAGACACTTGGAGAGGAATACTGTGACATTACTCAAGTTGCAGGACCTTATGGGCTTCCTCCTACTCCGGCCAGGCGTGCTTTGTTTATTGTATACCAGACGGCGATTCCGTACATTGCAGAGCGAATTAGTTCTAGAATGGCTTCCCAAGGCATTGTTCTTGCTGACTCTGAGTATGCCGAGAGTTACGGTGAAATTTCCCAGGGGAGGAGTAGTTTTCGGGTTTCAGCCACAAGCGAACTTTCTCCTTTGTCTGCCTCAGGGCGGTCTGCTTCAAGACTGACAAGGTTGAAGGAGAAACTCGGTGGATTTTGGTTGCATATGGTTCAGAGATGGCCTACGATGCTGCCTTTTGTTCGAGAGTTATTGCAGTTGCTTCTTCGTGCTAACCTCATGTTGTTTTACTTTGAAGGCCTCTATTATCATATATCCAAACGTGCTGCAGGCATTCGTTATGTGTTCATTGGAAAAGCATCAAATCAAAGACCCAGATATCAAATACTGGGAGTATTTCTGCTGATTCAACTTTGTGTAATAGCTGCCGAAGCGCTGCGTCGAAGGCATTTTACATCAATTGCTAGTTCAGTTCACCAGGCATCCTTTGCAACCCACAATACTTCAGCAGGACACGGTTTGCCTGTTCTAAATGAAGAAGGTAATTTGGCAACTCCAGATGCTGACAAAGGAAGTTGGGTTTCTGAATCTTCATCTTCTGAGCATAATGCAACTAGTGGGGCTAGCAAATGCACGCTTTGCCTGAGTAATCGTCAACACCCAACAGCTACTTCCTGTGGCCATGTATTTTGCTGGAATTGTATTACAGAATGGTGCAACGAAAAGCCAGAGTGCCCTCTTTGCCGCACCCCTTTAACACACTCAAGTCTAGTTTGTGTGTATCATTCGGACTTCTAG 1194 0.4757 MGWGHLGKHGSDSGNDGDAGPSTSTAEPRQFPSAAQPEMMRAAEKDDQYASFVYEACRDAFRQLFGTRVAVAYQNETKLLGQMLYYLLTTGSGQQTLGEEYCDITQVAGPYGLPPTPARRALFIVYQTAIPYIAERISSRMASQGIVLADSEYAESYGEISQGRSSFRVSATSELSPLSASGRSASRLTRLKEKLGGFWLHMVQRWPTMLPFVRELLQLLLRANLMLFYFEGLYYHISKRAAGIRYVFIGKASNQRPRYQILGVFLLIQLCVIAAEALRRRHFTSIASSVHQASFATHNTSAGHGLPVLNEEGNLATPDADKGSWVSESSSSEHNATSGASKCTLCLSNRQHPTATSCGHVFCWNCITEWCNEKPECPLCRTPLTHSSLVCVYHSDF 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03276 397 MobiDBLite consensus disorder prediction 1 40 - -
Car04g03276 397 Pfam Pex2 / Pex12 amino terminal region 46 280 IPR006845 -
Car04g03276 397 PANTHER PEROXISOME ASSEMBLY PROTEIN 10 27 394 - -
Car04g03276 397 ProSiteProfiles Zinc finger RING-type profile. 343 381 IPR001841 -
Car04g03276 397 ProSitePatterns Zinc finger RING-type signature. 358 367 IPR017907 -
Car04g03276 397 Pfam Zinc finger, C3HC4 type (RING finger) 341 385 - -
Car04g03276 397 MobiDBLite consensus disorder prediction 318 339 - -
Car04g03276 397 MobiDBLite consensus disorder prediction 16 31 - -
Car04g03276 397 CDD RING-HC_PEX10 342 381 - -
Car04g03276 397 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 317 394 IPR013083 -
Car04g03276 397 MobiDBLite consensus disorder prediction 323 339 - -
Car04g03276 397 SUPERFAMILY RING/U-box 342 386 - -
Car04g03276 397 PANTHER PEROXISOME BIOGENESIS FACTOR 10 27 394 - -
Car04g03276 397 SMART ring_2 343 380 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03276 Car-Chr4 61194546 61204256 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03276 337 393 C3H Transcription Factor Family AT4G28270 31.507 8.04e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03276 K13346 - gmx:100783914 677.167