Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03269 ATGACAGAGAGAAATCCAATAGCAGCAGATTCATCACCTGACAGTGATTTTAGCAACCAATGGCCTTTTGAACTATCTGATTACTTGAATTTTGATGACAACCAATGGCTACAAATTGATCCAACCACCGAGTCTAATTTTGTTTATCATGCCAATGAATTAGAAGGTGATCACAGCCACATAGAGGGGACTTCTAGTTCTACTAGTAATGAGAATTGGAAGAAGGAATTAGTTAAGGAGAGAGTTGCATTCAAAACAAAATCAGAGGTTGAAATACTTGATGATGGATACAGATGGAGGAAGTACGGAAAGAAAATGGTGAAGGACAGTCCCAATCCAAGGAATTATTATAGGTGTTCTGTGGAGGGATGTCCTGTTAAAAAGAGAGTGGAGAAAGATAAGGATGATCCGCGGTACGTGATAACAACCTACGAAGGCATGCACACGCACCCAACTCCTTCCTAG 465 0.4043 MTERNPIAADSSPDSDFSNQWPFELSDYLNFDDNQWLQIDPTTESNFVYHANELEGDHSHIEGTSSSTSNENWKKELVKERVAFKTKSEVEILDDGYRWRKYGKKMVKDSPNPRNYYRCSVEGCPVKKRVEKDKDDPRYVITTYEGMHTHPTPS 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03269 154 ProSiteProfiles WRKY domain profile. 88 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car04g03269 154 Gene3D WRKY domain 78 154 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car04g03269 154 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 153 - -
Car04g03269 154 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 153 IPR044810 GO:0003700
Car04g03269 154 Pfam WRKY DNA -binding domain 94 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car04g03269 154 SUPERFAMILY WRKY DNA-binding domain 86 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car04g03269 154 SMART WRKY_cls 93 152 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03269 Car-Chr4 61126259 61127259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03269 81 152 WRKY Transcription Factor Family AT5G26170 77.778 3.27e-41 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car04g03269 WRKY 3.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03269 - - gmx:100796836 201.83