Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03265 ATGGAGGAGGTGTTGTATGTAGTTACAGTGCCATTAATAGTAGGTAACATAGTCTGTGATAACTCAATAATAGCTACACACATGGATGTATCGAGATTTAAGGTGATGGCAGACACAGGTTCGTTGTCTAATTCTTTAACTAAGGTTTCCACCGAGACAGTTGTAGGCTCGGACAGTGGTAATTTGGATGTTGAAATTGGTATTACAAAAGTCACACCGATGGCATTGGATAGGGAAGAAGAAAGTTCTTTGATGGATATGATATCGCAAAATAAAAGTGATACGGTTGGTGGTGATGTAGCTTTAGCCCCAGAAAGTGAGGAGGAGGATTCGTTATCATTGGAAGGTGAACAGTTTATTGATAGCTCGTGTTCTCTATCGGTTGTTAGTGAGAATAGTAGCATAGGTGGAGAGGAGTTCGTCGCTTCTGATACTACTTCAGAAGTAGGGACACCATGTTTGATAGACATCGAGAAGAGCATCTGTCCTGTTAATATTGTTGCTCCAGCTGCCGATTTGGGGGAGTTGAATGTTGATACGGATATTATGAGTGGAACTCCAGCTGTTGATGTCAGTCTTGACCGAGAGACTGGAGTTGAATCAGGCCTAAATCCTTCCATACATCAGCTGCCTCAGGAAGAGGCAGTGAGTGTAACAGTTGTTCGGAGTGTTTTTGATTTGGATTATACGCCGCTATGGGGATTCATATCCCTATGTGGAAGAAGACCTGAAATGGAAGACGCACTTGCAACGGTTCCTCGATTTTTGACCATTCCTATTGAGATGCTAATTGGCGATAGAGCACATGATAGAATCAACAGGTGTTTTAGGCCACAGATGACCCATTTCTTTGGAGTATATGATGGCCATGGTGGCTGTCAGGTGGCAAATTATTGTCGCGAACGCATCCATATGGCGTTGGCTGAGGAAATAGAATTTGTGAAGCAAGGTTTAATCAACGGAAATATCAAGGATGGTTGTCAAGATCAATGGAAAAAAGTTTTCACCAATTGTTTCTTAAAGGTTGATGCTGAAGTTGGAGGAAAAGTTAATGATGAAGCTGTTGCTCCAGAAACTGTTGGCTCCACTGCTGTTGTTGCACTTATATGTTCATCGCATATCATAGTTGCAAATTGTGGTGATTCAAGAGCCGTTCTATGTCGTGGAAAAGAGCCTATAGCATTATCAGTGGACCATAAACCGAACCGAGAAGATGAATATGCAAGAATTGAAGCAGCTGGAGGAAAGGTGATACAGTGGAATGGTCATCGTGTATTTGGTGTTCTTGCAATGTCAAGGTCAATTGGTGATAGATATTTGAAACCGTGGATTATTCCAGAACCAGAAGTTCAGTTCCTTCCTCGTGCAAAAGAGGATGAATGTCTCATTCTAGCCAGTGATGGTCTGTGGGATGTGATGACAAATGAAGAGGTGTGCGACCTAGCTCGAAAACGCATACTTCTCTGGTACAAGAAAAACAACTTAGAACTACCCTTAGAAAGGGGTGAAGGAATTGATCCTGCTGCACAAGCAGCAGCAGAGTTCCTATCGAACCGCGCACTTCAGAAAGGAAGCAAAGACAACATCACCGTGATCGTTGTCGATTTGAAGCCTCAACGTAAGTATAAGAGCAAGACATGA 1641 0.426 MEEVLYVVTVPLIVGNIVCDNSIIATHMDVSRFKVMADTGSLSNSLTKVSTETVVGSDSGNLDVEIGITKVTPMALDREEESSLMDMISQNKSDTVGGDVALAPESEEEDSLSLEGEQFIDSSCSLSVVSENSSIGGEEFVASDTTSEVGTPCLIDIEKSICPVNIVAPAADLGELNVDTDIMSGTPAVDVSLDRETGVESGLNPSIHQLPQEEAVSVTVVRSVFDLDYTPLWGFISLCGRRPEMEDALATVPRFLTIPIEMLIGDRAHDRINRCFRPQMTHFFGVYDGHGGCQVANYCRERIHMALAEEIEFVKQGLINGNIKDGCQDQWKKVFTNCFLKVDAEVGGKVNDEAVAPETVGSTAVVALICSSHIIVANCGDSRAVLCRGKEPIALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVQFLPRAKEDECLILASDGLWDVMTNEEVCDLARKRILLWYKKNNLELPLERGEGIDPAAQAAAEFLSNRALQKGSKDNITVIVVDLKPQRKYKSKT 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03265 546 SUPERFAMILY PP2C-like 220 538 IPR036457 -
Car04g03265 546 ProSitePatterns PPM-type phosphatase domain signature. 283 291 IPR000222 GO:0043169
Car04g03265 546 ProSiteProfiles PPM-type phosphatase domain profile. 232 536 IPR001932 -
Car04g03265 546 CDD PP2Cc 237 536 IPR001932 -
Car04g03265 546 SMART PP2C_4 218 534 IPR001932 -
Car04g03265 546 Pfam Protein phosphatase 2C 276 529 IPR001932 -
Car04g03265 546 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 101 546 - -
Car04g03265 546 PANTHER ALPHABET, ISOFORM E-RELATED 101 546 - -
Car04g03265 546 Gene3D - 219 546 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03265 Car-Chr4 61085866 61090888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03265 1 546 PP2C-type Phosphatase Gene Family AT1G17550 47.687 3.14e-163 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03265 K14497 - gmx:100805281 812.757