Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03261 ATGATGCACATGACACTATATTGGGGAAAAAACGTGACACTCTTATTCGATTCGTGGAAAACCGATTCATGGACGAGTTATGTATTGAGTTTAATCGCGTGTTTCGTGATTGCAACTTTCTACCAATATCTGGAGAATATTCGGATTCGGCTGAAGTTTTTCTCCGGTGAGAGATCGCCGTCTCCGGTGCCGGAGATTCAGATTCCTCTTCTGCGGTTGAATAAGGTTTCGAGAAATAAGGTTGCGGAATCGGTTCTGTTTGGTGTGAATTCAGCGATTGGGTATTTGTTGATGTTGGCTATAATGTCGTTTAATGGAGGGGTTTTTGTGGCTATTGTAGTTGGTTTAACGGTTGGTTATTTCTTCTTTAGGAGTCAGGGTGAAGAAGATGCTGCTCTTGTTGTTGATAATTCTTGTGCATGCGCTTAG 429 0.4219 MMHMTLYWGKNVTLLFDSWKTDSWTSYVLSLIACFVIATFYQYLENIRIRLKFFSGERSPSPVPEIQIPLLRLNKVSRNKVAESVLFGVNSAIGYLLMLAIMSFNGGVFVAIVVGLTVGYFFFRSQGEEDAALVVDNSCACA 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03261 142 Pfam Ctr copper transporter family 4 123 IPR007274 GO:0005375|GO:0016021|GO:0035434
Car04g03261 142 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 142 IPR007274 GO:0005375|GO:0016021|GO:0035434
Car04g03261 142 PANTHER CTR FAMILY COPPER TRANSPORTER 1 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03261 Car-Chr4 61064747 61065539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03261 1 142 Inorganic Solute Cotransporters AT5G20650 57.823 1.36e-54 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03261 K14686 - gmx:100795071 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03261 04 61064747 61065539 Car04g03261 04 61064747 61065539 ECH
Car05g02878 05 73731577 73732008 Car04g03261 04 61064747 61065539 ECH
Car07g00378 07 3340499 3341257 Car04g03261 04 61064747 61065539 ECH
Car07g03012 07 56872098 56873887 Car04g03261 04 61064747 61065539 ECH