Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03247 ATGGCATTTCTCTTCTCCTCTCTTCCTCAGGTTCATGCTGCTGATGATTCACCTGTTAGTGGTGGGGGGCTCAGTCAGAATGGAAAATTCAGCTATGGTTATGCTAGCTCCCCTGGAAAGAGATCTTCAATGGAAGATTTTTATGAGACAAGAATTGACGGTGTCAATGGTGAAATTGTTGGCCTTTTTGGAGTTTTTGATGGTCACGGCGGTGTTCGTGCTGCTGAGTATGTCAAGCAAAACCTATTTAGTAATTTGATCAGCCATCCAAAATTCATTTCTGACACCAAATCTGCAATTGGTTTAATAGACTCTGAATTTCTGAAATCGGAACATAATCAACACCGAGATGCTGGATCAACTGCTTCCACTGCAATTCTCGTTGGTGACCGTTTGCTCGTCGCAAATGTTGGGGACTCAAGAGCTGTTATATGTAGGGGTGGAAATGCCATTGCTGTGTCACGAGATCACAAACCAGACCAAACTGATGAGAGACAAAGGATAGAAGATGCTGGGGGCTTTGTTATGTGGGCCGGAACTTGGAGAGTTGGTGGCGTTCTTGCTGTTTCTCGCGCATTTGGTGATAGACTACTGAAGCAATACGTTGTTGCTGATCCGGAAATCCAGGAAGAAAAGGTTGATAGCTCTCTTGAGTTTCTTATATTGGCAAGTGATGGGCTATGGGATGTTGTCTCAAACGAGGAAGCTGTTGCTATGATTAAACCAATTGAAGATGCCGAGGAAGCAGCAAAGAGGCTGATGAAAGAAGCATATCAGAGAGGTAGTTCTGACAACATCACTTGTGTGGTCGTTCGTTTTTTGATGAACCAAGGTTCTTCTTCTACTCGCAATAGCTCTGGCTAA 864 0.4398 MAFLFSSLPQVHAADDSPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVNGEIVGLFGVFDGHGGVRAAEYVKQNLFSNLISHPKFISDTKSAIGLIDSEFLKSEHNQHRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVAMIKPIEDAEEAAKRLMKEAYQRGSSDNITCVVVRFLMNQGSSSTRNSSG 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03247 287 ProSiteProfiles PPM-type phosphatase domain profile. 31 273 IPR001932 -
Car04g03247 287 SMART PP2C_SIG_2 42 273 IPR001932 -
Car04g03247 287 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 5 282 - -
Car04g03247 287 PANTHER ALPHABET, ISOFORM E-RELATED 5 282 - -
Car04g03247 287 SMART PP2C_4 21 271 IPR001932 -
Car04g03247 287 Pfam Protein phosphatase 2C 60 266 IPR001932 -
Car04g03247 287 ProSitePatterns PPM-type phosphatase domain signature. 62 70 IPR000222 GO:0043169
Car04g03247 287 CDD PP2Cc 30 273 IPR001932 -
Car04g03247 287 Gene3D - 23 278 IPR036457 -
Car04g03247 287 SUPERFAMILY PP2C-like 25 273 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03247 Car-Chr4 60881621 60885422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03247 4 282 PP2C-type Phosphatase Gene Family AT4G31750 87.456 7.25e-180 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03247 K17506 - gmx:547661 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03247 04 60881621 60885422 Car04g03247 04 60881621 60885422 ECH