Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03243 ATGGGAAGGGTACTAGGCAAAGGAACATTCGCAAAAGTATACTATGGAAAAGAAATTGAAACTGGTGAAGGAGTAGCAATAAAAGTAATCGACAAAAACAAAGTGAAAAAAGAAGGAATGATGGAGCAAATCAAACGCGAGATTTCCGTGATGAGGTTAGTAAAACATCCAAACATCGTGAACCTTAAAGAAGTCATGGCAACAAAAACAAAAATCTTGTTCGTGATGGAATACATACGTGGCGGCGAATTATTCGCCAAAGTGGAAAAGGGAAAATTAAAAGAAGAAACCGCTAGAAAGTACTTCCAACAACTCATAAGCGCGGTTGAATTTTGCCACAGTAGAGGAGTTGCACACCGCGATTTAAAACCTGAGAATTTGTTACTCGACGAACACGGAGACCTTAAAATCTCCGATTTTGGTCTCTCCGCTTTGCCAGAACAGCTTCGGCAGGACGGGCTTTTACATACTCAATGTGGGACCCCCGCTTACGTGGCACCCGAGGTTGTTAGAAAAAGAGGTTATAACGGTTTTAAAGCTGATACTTGGTCTTGTGGTGTTATTCTTTATGCTTTACTTGCTGGATTTCTTCCTTTTCAACATGAAAATCTTATTACTATGTATAATAAGGTTTTCAAAGAAGAGTATCGATTCCCACCTTGGTTTTCGCCTGAATCAAAGAGATTAATCTCGAAGATTCTAGTTGCGGATCCTGAAAGAAGAATCACTATTTCTTCAATTATAAATGATACATGGTTCAAAAAAGGTTTATCAACTATTAATTCAAATGATGATTTGGAATCAGAGATGGTAATGATTAATTCTTCGCCTAAATTCTTCAATGCGTTTGAATTTATTTCTTCGATGTCTTCGGGGTTTGATCTATCGGGTTTATTCGAGGAAAAGAAAAAGAGAGGTTCTGTTTTTACTTCCAAGTGTTCTGTTTCGGAGATTGTGTCTAAGATTGAAAGTGCTGCGAAAAGTTTAAGGTTTAAGGTTGGGAAGGTTAAGGAATTTAAATTGAAGTTGCAAGGGATGATGGAAGGGAGAAAAGGGAAGTTGGCTGTGACGGCGGAGATATATGAGGTGGCGCCGGAGCTTGCGGTGGTTGAATTTTCTAAATGTTCCGGGGGAATGATGCCACGTGTACCGATAGTTAGGATTTTGGTGAGACTGTACATACTCCACCCTAGAAGCCCTCGATTGTATAATAATAAATGTAATGGCTTACATGAAATTTGA 1242 0.3897 MGRVLGKGTFAKVYYGKEIETGEGVAIKVIDKNKVKKEGMMEQIKREISVMRLVKHPNIVNLKEVMATKTKILFVMEYIRGGELFAKVEKGKLKEETARKYFQQLISAVEFCHSRGVAHRDLKPENLLLDEHGDLKISDFGLSALPEQLRQDGLLHTQCGTPAYVAPEVVRKRGYNGFKADTWSCGVILYALLAGFLPFQHENLITMYNKVFKEEYRFPPWFSPESKRLISKILVADPERRITISSIINDTWFKKGLSTINSNDDLESEMVMINSSPKFFNAFEFISSMSSGFDLSGLFEEKKKRGSVFTSKCSVSEIVSKIESAAKSLRFKVGKVKEFKLKLQGMMEGRKGKLAVTAEIYEVAPELAVVEFSKCSGGMMPRVPIVRILVRLYILHPRSPRLYNNKCNGLHEI 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03243 413 SUPERFAMILY Protein kinase-like (PK-like) 2 288 IPR011009 -
Car04g03243 413 ProSitePatterns Protein kinases ATP-binding region signature. 5 28 IPR017441 GO:0005524
Car04g03243 413 Pfam Protein kinase domain 3 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g03243 413 ProSiteProfiles NAF domain profile. 275 300 IPR018451 GO:0007165
Car04g03243 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Car04g03243 413 Gene3D Kinase associated domain 1, KA1 274 386 - -
Car04g03243 413 CDD CIPK_C 281 381 - -
Car04g03243 413 Gene3D Phosphorylase Kinase; domain 1 1 78 - -
Car04g03243 413 SMART serkin_6 1 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g03243 413 Gene3D Transferase(Phosphotransferase) domain 1 79 259 - -
Car04g03243 413 PANTHER - 1 380 - -
Car04g03243 413 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 25-RELATED 1 380 - -
Car04g03243 413 ProSiteProfiles Protein kinase domain profile. 1 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g03243 413 Pfam NAF domain 277 335 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03243 Car-Chr4 60811961 60813682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03243 1 380 CBL-interacting serine-threonine protein kinases AT5G25110 67.750 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Car04g03243 Pkinase 8.7e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03243 - - tcc:18587713 577.785