Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03241 ATGGAATTCTCAACATGCGTTGATACTTCACTCAATCTTAATTTTAATGTTCCTTCTATACACAAGGATGAAGTTTTGGTTGAAGAGTTGAATCGTCTCAATTGTGAGAACAAGAGGCTGAATGAAACATTGACTAACATGTGTGAGAATTATGAAGCTATGCAAAAACATTTGAGCCAATTGATGAACCAAGATTTTGAAAATCAAACACAACAATCAAGAAAGAGAAAATTTGGTATTAAAGGCATTAATATTAATAATGAGTGTAGCAATGTTACTGATGATGAATCACTAATCAAAAGGTCCTGTAGAGATGTCTCTTCTCCTAATAAGGCTTACAAGGTTCTATTCAAGACAGAAGCATTTAATAATAGCTTATATGTGATGGATGGATATCAATGGAGGAAATATGGTCAGAAGGTTACTAAAGATAATCCATCTCCTAGAGCTTACTTTAGGTGCTCCCATGCCCCAAGCTGCCCAATTAAAAAGAAGGTACAAAGAAGTTTAGAAGACCCTACAATACTAGTTGCAACATATGAAGGAGAACACAATCATGGTCATAAAAAATCTGAAATGTCATTGGTGTCAAGTCAAAGTGAAGAATCCCCTGTAGTTTCAGTTCATGTTTCTTCACCTAAACCAATTATTCAAAAGACATGTCCAACCATTAAGGATGACTTGGTTGATAATGTTCCAAAATCATCTATGCAACATTTTTTGGTTCAACAAATGGCTAATTCTTTGACAAAGGATCCCAATTTCACTGCAGCACTTGCCACTGCTATTTCAGGAAGAATTCTAGGATCAGACTTCTAA 819 0.3492 MEFSTCVDTSLNLNFNVPSIHKDEVLVEELNRLNCENKRLNETLTNMCENYEAMQKHLSQLMNQDFENQTQQSRKRKFGIKGININNECSNVTDDESLIKRSCRDVSSPNKAYKVLFKTEAFNNSLYVMDGYQWRKYGQKVTKDNPSPRAYFRCSHAPSCPIKKKVQRSLEDPTILVATYEGEHNHGHKKSEMSLVSSQSEESPVVSVHVSSPKPIIQKTCPTIKDDLVDNVPKSSMQHFLVQQMANSLTKDPNFTAALATAISGRILGSDF 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03241 272 Coils Coil 23 64 - -
Car04g03241 272 ProSiteProfiles WRKY domain profile. 123 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car04g03241 272 Gene3D WRKY domain 110 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car04g03241 272 SUPERFAMILY WRKY DNA-binding domain 125 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car04g03241 272 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 19 269 IPR044810 GO:0003700
Car04g03241 272 Pfam WRKY DNA -binding domain 130 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car04g03241 272 PANTHER WRKY TRANSCRIPTION FACTOR 40-RELATED 19 269 - -
Car04g03241 272 SMART WRKY_cls 128 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03241 Car-Chr4 60769994 60771756 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03241 4 267 WRKY Transcription Factor Family AT1G80840 43.624 1.47e-71 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car04g03241 WRKY 3.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03241 - - gmx:100810978 305.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03241 04 60769994 60771756 Car05g02912 05 74061696 74064592 PCT