Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03240 ATGGTTGAAGTTATGAATATCAAGTGCACAAAACTTGAGTCCCATCTTCAAGAGATCAACAAGGAAGAACAAAAAGGGATAAGTTCAAATCAAATTGGGTTAGTACCTAATCTTGATACAACCAAAAGAGCAAGACAAGAGTTTCCCACCACAAAAAAGTCATTACAAGTCTTTGTCAAAACCCACCCTAATGATGATAGTTTGATGATACAAGATGGATATCAATGGAGGAAGTATGGGCAAAAGGTAACCAAAGAAAATGCTTCTCCTAGAGCTTACTTCAGGTGCTCCATAGCTCCTAGTTGCCCCGCAAAAAAGAAGGTACAAAAATGCATACATGATAGGTCTATCATTGTTGCAACTTATGATGGAGAACACAACCATGTTTCCCCTCATGAGTCATTAAGACCATCATCTTCATCCACACCTAAAGTTCCATCATCAATAGCTAATAATAAATCACCTCTACCAACACTAAATGACACAGAAGTCATAAACACTGACTTTGTTGTTTCTGATAATTGGACTCAATCATCTACTGAAATTTGTGAGGATATCATGCAAAAGTGTGGCTATGGAAGGCACATCAAAATCAAAGAATTTGCAAGTTCCTTAATCAAAGATCCTGACTTCACTGCAGCATTAGCTGAAGCAGTTGCGCAAACCATTACCGGTCAACATGAGCGACAAGGTCTAAATCTCAATTTGAATCTTTCAGAGGAGTGA 726 0.3802 MVEVMNIKCTKLESHLQEINKEEQKGISSNQIGLVPNLDTTKRARQEFPTTKKSLQVFVKTHPNDDSLMIQDGYQWRKYGQKVTKENASPRAYFRCSIAPSCPAKKKVQKCIHDRSIIVATYDGEHNHVSPHESLRPSSSSTPKVPSSIANNKSPLPTLNDTEVINTDFVVSDNWTQSSTEICEDIMQKCGYGRHIKIKEFASSLIKDPDFTAALAEAVAQTITGQHERQGLNLNLNLSEE 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03240 241 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 223 IPR044810 GO:0003700
Car04g03240 241 Gene3D WRKY domain 54 132 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car04g03240 241 PANTHER WRKY TRANSCRIPTION FACTOR 49 1 223 - -
Car04g03240 241 SMART WRKY_cls 70 130 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car04g03240 241 ProSiteProfiles WRKY domain profile. 65 131 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car04g03240 241 MobiDBLite consensus disorder prediction 133 159 - -
Car04g03240 241 Coils Coil 2 22 - -
Car04g03240 241 SUPERFAMILY WRKY DNA-binding domain 66 130 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car04g03240 241 MobiDBLite consensus disorder prediction 127 159 - -
Car04g03240 241 Pfam WRKY DNA -binding domain 71 128 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03240 Car-Chr4 60763461 60765994 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03240 42 227 WRKY Transcription Factor Family AT1G80840 42.640 5.62e-42 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car04g03240 WRKY 4e-22 CL0274