Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03231 ATGGctgcttcttcttcatcaacctctgtgttgcttctgtttcttctcttTGGCTTTGCTGCTTCAGCTAAAGATATCTTGCTTGGAGGAAAGACAGATGCATGGAAGGTTCCATCTTCTGAATCTGACTCACTTAACAAATGGGCTCAAAGTGTTCGTTTCCAAGTTGGTGACCATCTTGTTTGGAAATATGAGGCTGGAAAAGACTCTGTTTTGCTAGTGAGCAAAGATGATTATGTTAACTGCAACATCTCAAACCCAATAAAAAAGTACAATGATGGGCAAACTAAGGTGAGATTTGATCATGCTGGACCATACTACTTCATCAGTGGAGAAAAGGGTCATTGTGAGAAGGGTCAGAAGCTAACTGTGGTGGTTATGAGTCCAAGGGGAAAAAGTATCACAGCTACTTCACCTGCACCTTCACCAGCTGAATTTGAAGGCCCAGCTATTGCTCCAACCAGTAGTGCAACTGTTTTGCAAAGTGGTGGTGGTGTTTTGATGGCTATTGGAGTGATTGCAATGTTGGTTTTCTGA 537 0.3892 MAASSSSTSVLLLFLLFGFAASAKDILLGGKTDAWKVPSSESDSLNKWAQSVRFQVGDHLVWKYEAGKDSVLLVSKDDYVNCNISNPIKKYNDGQTKVRFDHAGPYYFISGEKGHCEKGQKLTVVVMSPRGKSITATSPAPSPAEFEGPAIAPTSSATVLQSGGGVLMAIGVIAMLVF 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03231 178 Gene3D - 27 139 IPR008972 -
Car04g03231 178 SUPERFAMILY Cupredoxins 23 127 IPR008972 -
Car04g03231 178 ProSiteProfiles Phytocyanin domain profile. 24 128 IPR003245 GO:0009055
Car04g03231 178 CDD OsENODL1_like 24 127 IPR041846 -
Car04g03231 178 PANTHER BLUE COPPER PROTEIN 6 176 IPR039391 GO:0009055
Car04g03231 178 Pfam Plastocyanin-like domain 35 120 IPR003245 GO:0009055
Car04g03231 178 PANTHER EARLY NODULIN-LIKE PROTEIN 3 6 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03231 Car-Chr4 60682694 60683440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03231 1 178 Phytocyanin Superfamily AT4G31840 49.721 5.55e-60 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03231 - - gmx:100305551 236.884