Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03227 ATGGGAACAAATCTCAGCATTCCCAAAACTGAAAAGTTTTGTGAAAATGGTGAAAATGACAATCTTAGATATGGCTTATCATCTATGCAAGGATGGCGTGCAACAATGGAAGATGCTCATGCGGCTCTTCTTGATATCGATACATCCACCTCGTTTTTTGGCGTTTATGATGGTCATGGAGGTAAGGCGGTTGCAAAGTTTTGTGCCAAGTACCTTCACCAACAGGTGTTCAGGAGTGAAGATTACACAGCTGGAGATGTTGGAACATCTCTTCAGAAAGCGTTTTTCAGAATGGACGAGATGATGCGTGGTCAAAGGGGATGGAGGGAATTAGCAGTGTTAGGTGATAAGGTAAACAGGTTCAACGGAATGTTCGAAGGATTGATTCGGTCTCCAAGAAGCAGCGATGATAAGGACCAAACTGATGATTGGGCCTTTGAGAAGGGGCCTCATTCTGATTTTGTTGGACCAACTTCAGGAAGTACTGCTTGTGTTGCAATCATTAGAAACAACCTACTTTTTGTTGCAAATGCCGGTGATTCACGCTGTGTAATATCTAGGAAGGGTCAGGCATACAATTTGTCTAGAGATCACAAACCTGATCTTGAGATTGAGAGGGATAGAATCTATAAAGCTGGCGGTTTTATTCACGCAGGACGAGTTAACGGAAGTTTAAATCTTGCAAGAGCTATAGGTGACGTGGACTTTAAGAACAATAGATTTTTGTCTGCCGAAAAACAAGTTGTTACCGCCAAGCCAGATATAAACACTGTTGACCTTTGTGACGATGATGAATTTTTAGTGCTAGCTTGTGATGGCATATGGGATTGCTTGTCGAGCCAACAATTGGTCGATTTTGTGCGTCAAGAACTTCTCATGGAAACCAAACTTTCTGAGGTTTGTGAAAGAGTGCTAGACAGGTGTTTGGCACCGTCGTTGGCTGTCGGGGACGGGTGCGATAACATGACAATGATCTTGGTGCAGTTCAAAAAACCAGTGCAGACTAGTGCACCAGCTGAAGATCAATCATCTTCAAATGAACATGGTGCATCTGAATCAAATTTGGAGAGTGGTTGA 1077 0.429 MGTNLSIPKTEKFCENGENDNLRYGLSSMQGWRATMEDAHAALLDIDTSTSFFGVYDGHGGKAVAKFCAKYLHQQVFRSEDYTAGDVGTSLQKAFFRMDEMMRGQRGWRELAVLGDKVNRFNGMFEGLIRSPRSSDDKDQTDDWAFEKGPHSDFVGPTSGSTACVAIIRNNLLFVANAGDSRCVISRKGQAYNLSRDHKPDLEIERDRIYKAGGFIHAGRVNGSLNLARAIGDVDFKNNRFLSAEKQVVTAKPDINTVDLCDDDEFLVLACDGIWDCLSSQQLVDFVRQELLMETKLSEVCERVLDRCLAPSLAVGDGCDNMTMILVQFKKPVQTSAPAEDQSSSNEHGASESNLESG 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03227 358 SUPERFAMILY PP2C-like 4 330 IPR036457 -
Car04g03227 358 SMART PP2C_SIG_2 28 329 IPR001932 -
Car04g03227 358 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Car04g03227 358 Pfam Protein phosphatase 2C 134 311 IPR001932 -
Car04g03227 358 PANTHER PROTEIN PHOSPHATASE 2C 1 341 IPR015655 GO:0004722|GO:0006470
Car04g03227 358 Gene3D - 1 330 IPR036457 -
Car04g03227 358 CDD PP2Cc 23 329 IPR001932 -
Car04g03227 358 SMART PP2C_4 12 327 IPR001932 -
Car04g03227 358 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Car04g03227 358 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 341 - -
Car04g03227 358 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Car04g03227 358 MobiDBLite consensus disorder prediction 335 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03227 Car-Chr4 60665279 60669802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03227 1 341 PP2C-type Phosphatase Gene Family AT2G25070 74.487 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03227 K17499 - zju:107419763 585.874