Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03223 ATGTCGGATTCTCCTTCATCTTGTTCCTCCTCCAACAACATCATTAACTTCTCCAAAACCCTTCTTCTTCATTTTCTAGTACTCTTCCTCCTCACACTTTTTTCCCTCCCAAAAACAAGCTCACTTTCCTTCAACATAACAAACTTCGACGACCAAACCGTCGCAAAAAACATGCTATACGAAGGTGACGGAAAATCCACAAACGGTTCCATTGACTTAAACAAAGTAAGTTACCTTTTCCGCGTAGGAAGAGCAATCTATTCACAACCATTACACTTATACGACAACACAACCAACACTCTCACCGATTTCACAACCCGTTTTACCTTCACAATTGATAAACTAAACGACACGTCGTTTGGCGATGGTTTCGCTTTTTACTTAGCACCTTTAGGTTACCAAATTCCACCCAATTCAGCTGGGGGTGTTTTTGGTCTTTTCAATGCTACAACAAATAGTGATCTTCTTATCAACCATGTTGTTGCTGTTGAGTTTGATACTTTTGTTGGGTCAACTGACCCACCAATGAAACATGTTGGTATTGATGATAATGCTTTGACTTCTGTTGCTTTTGGGAAATTTGATATTGATAATAATCTTGGTAGATTGTGTTATGTTTTGATTGATTATAGTTCTAGGACTAAGATTTTGGAAGTTTTTTGGTCTTTTAAGAGGAGGATTGTGAAAGGTGATAGTGATTTTGCTGATTTGGTACGAAATTCGAGTATTTCGTATCGAATTGATCTTATGGAGAAGCTACCTGAATTTGTGAATGTTGGATTTTCGGCTTCAACGGGGCTTTCGACTGAGAGTAATGTTATTCATAGTTGGGAGTTTAGTTCGAGTTTGAATTCGAGTGTGGATTTGTTCGAGGGAAATGAAGGAAAAGGGATGAAGAAAAAGAAGTTGAAtgtggttgtgattgtggttgcagtggttgttCCTGTTATTTTGGTATTTTTTATAGCAGGTGTTGTTGGTTGGATGATATTGAAGAGGAAAAGAAAGAATTTTGATGATGGGTTGGATGAATATGGAGGACCCGTTTCGGCGAAATTCGATTTGGATAAAGGGACTATACCGAGAAGATTCGAGTATAGTGAACTAGTTGCAGCTACTAATGGTTTTTCTGATGATAGAATGCTTGGAAGAGGTGGTTATGGACAAGTTTACAAAGGTGTTTTGAGTTATCTAGGAAGAGTTGTTGCTGTCAAGAGGATTTTTGCTGATTTTGAGGATTCAGAAAGAGTTTTCATCAATGAGGTTAGGATCATAAGCCGTTTGATAcatagaaacttggttcaattcatagAACAATGTGTTCTTCACAGAGACATAAAATCAGGTAATGTGTTGTTGGACACTGATTTCAGCACGAAGCTCGGTGATTTCGGTATGGCGAAGCTGGTTGATCCAATGTTAAGGACACAAAGAACAGGTGTAGTTGGAACTTATGGTTATTTAGCACCTGAATACATCAATGGAGGAAGGGCTAGTAAAGAATCTGATATGTATAGTTTTGGAATTGTGGCTTTAGAACTTGCAACTGGTAGAAGGATTTTTCAAGAGGGTGAGTTTCATGTGCCTTTGATGAATTGGTGTTGGGGACTTTATGTTGAAGGGAATCTTATGAGTGCTGCTGATGAAAGATTGAATCAAATGTTTGATGTTAGTGAAATGAAGAGTTTGCTTATTGTAGGGTTATGGTGTACTCATTCAAATGATAAAGAAAGGCCTAAGGCTTATGAAGTGATTAAGGTTCTTCAACTTGAAATGGCATTACCTGAACTACCACTTGATATGCATGATCGTGTTCCTCCTATTGTAACTTTTAGACAATCTACTAATTGTGTTTCTTTGTCACCACATATGACTAATAGTCTTGTTAGTGTTGGACGTTAG 1902 0.367 MSDSPSSCSSSNNIINFSKTLLLHFLVLFLLTLFSLPKTSSLSFNITNFDDQTVAKNMLYEGDGKSTNGSIDLNKVSYLFRVGRAIYSQPLHLYDNTTNTLTDFTTRFTFTIDKLNDTSFGDGFAFYLAPLGYQIPPNSAGGVFGLFNATTNSDLLINHVVAVEFDTFVGSTDPPMKHVGIDDNALTSVAFGKFDIDNNLGRLCYVLIDYSSRTKILEVFWSFKRRIVKGDSDFADLVRNSSISYRIDLMEKLPEFVNVGFSASTGLSTESNVIHSWEFSSSLNSSVDLFEGNEGKGMKKKKLNVVVIVVAVVVPVILVFFIAGVVGWMILKRKRKNFDDGLDEYGGPVSAKFDLDKGTIPRRFEYSELVAATNGFSDDRMLGRGGYGQVYKGVLSYLGRVVAVKRIFADFEDSERVFINEVRIISRLIHRNLVQFIEQCVLHRDIKSGNVLLDTDFSTKLGDFGMAKLVDPMLRTQRTGVVGTYGYLAPEYINGGRASKESDMYSFGIVALELATGRRIFQEGEFHVPLMNWCWGLYVEGNLMSAADERLNQMFDVSEMKSLLIVGLWCTHSNDKERPKAYEVIKVLQLEMALPELPLDMHDRVPPIVTFRQSTNCVSLSPHMTNSLVSVGR 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03223 633 SMART serkin_6 376 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g03223 633 SUPERFAMILY Protein kinase-like (PK-like) 360 614 IPR011009 -
Car04g03223 633 PANTHER PUTATIVE-RELATED 438 605 - -
Car04g03223 633 PANTHER PUTATIVE-RELATED 25 440 - -
Car04g03223 633 SUPERFAMILY Concanavalin A-like lectins/glucanases 41 283 IPR013320 -
Car04g03223 633 PANTHER - 438 605 - -
Car04g03223 633 PANTHER - 25 440 - -
Car04g03223 633 ProSitePatterns Protein kinases ATP-binding region signature. 382 405 IPR017441 GO:0005524
Car04g03223 633 CDD lectin_legume_LecRK_Arcelin_ConA 42 283 IPR001220 GO:0030246
Car04g03223 633 Pfam Legume lectin domain 41 284 IPR001220 GO:0030246
Car04g03223 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Car04g03223 633 ProSitePatterns Legume lectins alpha-chain signature. 253 262 IPR000985 -
Car04g03223 633 Gene3D - 39 290 - -
Car04g03223 633 ProSitePatterns Legume lectins beta-chain signature. 161 167 IPR019825 -
Car04g03223 633 Gene3D Transferase(Phosphotransferase) domain 1 442 596 - -
Car04g03223 633 Pfam Protein kinase domain 439 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g03223 633 Pfam Protein kinase domain 377 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g03223 633 Gene3D Phosphorylase Kinase; domain 1 351 441 - -
Car04g03223 633 ProSiteProfiles Protein kinase domain profile. 283 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03223 Car-Chr4 60642816 60644882 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03223 26 612 Receptor kinase-like Gene Family AT5G10530 38.132 2.23e-128 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Car04g03223 Lectin_legB 9e-58 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03223 - - gmx:100791220 739.569