Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03219 ATGGAAAACTGTCACCGGAATAACGTTGGTAATCTCGTTCTCGGTCACCACACTACCAAATCACCAACATTCTCCACCAACTTCCGTCTATGGAACTCTCTCTCCGCTGCCTCCTTCCGCCGTCTCATATTCGATGCCGTCAGCTGCGGTGGCAGCTCTCGTTACAATAACCGCCGCCACAGCTTCGAAGATGAAGACCCCGACGACTTCTCTTCAACGGCAAGATCAGATTCTTCTTTCTCCGACGACAAACGGCAACTAAAACCAAAACCGAATGCGAAGTCGGAGAAACTATCGGATCTTCTAAACATGgcggagtcggaaacggaagcggaagcgaagaagaagGAAGAAGCTCTAGAGAAACTGAAACAACTCGTGAAGGATTTGCATCACGAAGAGGATTCAGCGAAACGGCGAGAAGCTGCAACCACCGTGAGAATGCTCGCTAAAGAGAATTTGGAAGTTAGAGGAACGCTTTCAATGCTCGGAGCTATTCCTCCTCTCGTCGCAATGCTCGATTCGGAAGACCTAGATTCTCAGATCGCTTCGCTCTACGCGTTGCTCAATCTCGGAATCGGAAACGATGCAAATAAAGCAGCCATTGTTAAAGTTGGCTCTGTTCACAAGATGCTTAAGCTTATTGAATCATCAGATGGTACTGATTCTGCTGTTTCTGAAGCGATTGTTGCAAATTTCCTTGGATTGAGTGCTTTGGATTCGAACAAACCGATAATTGGTTCTTCTGCTGCAATGCCCTTTTTAGTTAGAACCCTTAAGAGTTTAGATAAGAAAAGTAGTACTCAAGCTAAGCAAGATGCTCTTAGAGCACTTTACAATCTTTCAATCTTCCCAGCCAATATTTCATTCATTTTGGAAACCGATTTGGTCCCGTTTCTGATAAATTCGATTGGAGACATGGAAGTAACTGAAAGAAACCTTTTGATCCTGAGTAACTTGGTATCAACTAGAGCGGGTCGAAAAGCCATAAGTGCTGTACCTGATGCCTTTCCTATTTTGGTCGATGTATTGAATTGGAATGATTCGCCTGAATGCCAGGAAAAGGTTTCGTATGTTTTGATGGTTATGTCTCACAAATCGTATGGTGATAAACAGGCCATGATTGAGGCAGGGATTGTGTCATCACTTCTCGAGTTGTCGCTTATTGGTACTACTTTGTCTCAGAAACGAGCGTCAAGGCTATTGGAGAGTTTGAGAATAGATAAAGGGAAACAGGTTTCGGGGAACTATGGTGGAAATTTAGGTGCAACAGTCTCTGCCCCAATTTGCGGATCTTCATCGTCATGTGCAAAACCAGATGGAGATGGAGTAGGAAAAGAGTGTTTGGAAGAGGAGGAAGATATGATGAGTGAGGAGAAGAAAGCAGTAAAGCAATTAGTCCAGTTGAGTTTGCAAAACAACATGAGGAAAATTGTGAAGAGGGCCAACTTGCCTCAAGATATCGTTCCATCGGATCATTTTAAGTCACTCACTTCAAGCTCAACTTCAAAGAGCTTACCATTCTGA 1527 0.427 MENCHRNNVGNLVLGHHTTKSPTFSTNFRLWNSLSAASFRRLIFDAVSCGGSSRYNNRRHSFEDEDPDDFSSTARSDSSFSDDKRQLKPKPNAKSEKLSDLLNMAESETEAEAKKKEEALEKLKQLVKDLHHEEDSAKRREAATTVRMLAKENLEVRGTLSMLGAIPPLVAMLDSEDLDSQIASLYALLNLGIGNDANKAAIVKVGSVHKMLKLIESSDGTDSAVSEAIVANFLGLSALDSNKPIIGSSAAMPFLVRTLKSLDKKSSTQAKQDALRALYNLSIFPANISFILETDLVPFLINSIGDMEVTERNLLILSNLVSTRAGRKAISAVPDAFPILVDVLNWNDSPECQEKVSYVLMVMSHKSYGDKQAMIEAGIVSSLLELSLIGTTLSQKRASRLLESLRIDKGKQVSGNYGGNLGATVSAPICGSSSSCAKPDGDGVGKECLEEEEDMMSEEKKAVKQLVQLSLQNNMRKIVKRANLPQDIVPSDHFKSLTSSSTSKSLPF 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03219 508 Coils Coil 446 469 - -
Car04g03219 508 SUPERFAMILY ARM repeat 123 405 IPR016024 -
Car04g03219 508 MobiDBLite consensus disorder prediction 55 94 - -
Car04g03219 508 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 508 - -
Car04g03219 508 SMART arm_5 366 407 IPR000225 GO:0005515
Car04g03219 508 SMART arm_5 153 193 IPR000225 GO:0005515
Car04g03219 508 SMART arm_5 284 322 IPR000225 GO:0005515
Car04g03219 508 SMART arm_5 195 238 IPR000225 GO:0005515
Car04g03219 508 SMART arm_5 239 283 IPR000225 GO:0005515
Car04g03219 508 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 508 - -
Car04g03219 508 Gene3D - 260 416 IPR011989 -
Car04g03219 508 Gene3D - 113 259 IPR011989 -
Car04g03219 508 MobiDBLite consensus disorder prediction 57 94 - -
Car04g03219 508 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 164 206 IPR000225 GO:0005515
Car04g03219 508 Coils Coil 102 140 - -
Car04g03219 508 Pfam Armadillo/beta-catenin-like repeat 162 191 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03219 Car-Chr4 60586672 60589382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03219 67 429 U-box Gene Family AT1G24330 29.730 3.55e-32 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03219 - - mtr:MTR_1g014420 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03219 04 60586672 60589382 Car05g02919 05 74143381 74145491 PCT