Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03215 ATGGAAAGACTAAACAAAGAAACTCCTCTAAGTCCAAGCACACCATTACAAAATCAACATGAAAAAAAGAAGAAACAACAATCTTTTGAAGAATTAGAAGAGGAAGAAAAAGACACAAAGGTAGAAACTTTATTTGATTTAAATGTAATTAGCAATGATTTTGATCTTGATATTAATCAAGAAGGACAAGAACTCAATCTTATAACTTGTTTAGATGTTGGGTCATCTTCATCTAATCAAAATTCATCACAAAACAACCTTATTGGTTGTTCTCAAACAGAACAAAGAGTTTTCTCTTGCAACTATTGTCATAGAAAATTCTATAGCTCACAAGCATTAGGTGGACACCAAAATGCTCATAAAAGAGAGAGATCAATAGCAAAAAGAGGACAAAGATTTGGTTTTGGAACACAAATAATAGCCTCATCAAATTCTTCTTTTAATTTTCCTATTATGCATAAACAAAGTTATGCAAACATGGCTTCTTTACCTCTTTATGGAGCTTATAGTAATAAATCACTTGGAATTCAAGCACACTCCATGATTCAAAAGccttctcatgtttcatctaatggatttggaaaatcttatggacatcatcatcaaaatcatcatggttggtcaacatcatcaacattattagcatcatcaAGAGGAAGTGTTGGTAGGTTTGAAGTGGTTGATACTATGATGAATTCTTCAGCTAAAAAAGAAATTAGTGGATATGTTGTTAGTGGAGGAACATGTTTGAAGAGTAGTAATCAAGAAGAAATTAAGAAGAAGCAACTTGATTTATCACTTAAGCTATGA 810 0.2753 MERLNKETPLSPSTPLQNQHEKKKKQQSFEELEEEEKDTKVETLFDLNVISNDFDLDINQEGQELNLITCLDVGSSSSNQNSSQNNLIGCSQTEQRVFSCNYCHRKFYSSQALGGHQNAHKRERSIAKRGQRFGFGTQIIASSNSSFNFPIMHKQSYANMASLPLYGAYSNKSLGIQAHSMIQKPSHVSSNGFGKSYGHHHQNHHGWSTSSTLLASSRGSVGRFEVVDTMMNSSAKKEISGYVVSGGTCLKSSNQEEIKKKQLDLSLKL 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03215 269 ProSitePatterns Zinc finger C2H2 type domain signature. 100 120 IPR013087 -
Car04g03215 269 MobiDBLite consensus disorder prediction 1 37 - -
Car04g03215 269 SUPERFAMILY beta-beta-alpha zinc fingers 93 125 IPR036236 -
Car04g03215 269 ProSiteProfiles Zinc finger C2H2 type domain profile. 98 125 IPR013087 -
Car04g03215 269 Gene3D Classic Zinc Finger 74 149 - -
Car04g03215 269 MobiDBLite consensus disorder prediction 18 37 - -
Car04g03215 269 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 6 269 - -
Car04g03215 269 Coils Coil 18 42 - -
Car04g03215 269 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 6 269 IPR044246 GO:0009788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03215 Car-Chr4 60529667 60530958 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03215 33 269 C2H2 Transcription Factor Family AT5G10970 39.231 3.91e-42 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03215 - - lja:Lj5g3v0526470.1 275.018