Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03210 ATGAAAATTCTTCTCATTTTTCTCCTTATTCTTCACAAACCCATTTGGATTATTGCCTCACTTGTAGACCCTTTTGTTTCTTCACCTCAAATTCCACCTTTTTCTCCAATTCATACAACAATCACAATGGATGCTTCCTCTCCAGGTATTCATGTGAGAGATGAACAGCAAAAAAATGATTCACACAATAAAAAAGTTATGGTTTTTGTGGTAGCTAGCACTGCACTTGGTGCTGTCATTTTGTCTTTGTTAAGCTTCTGGATTTATTACACCAAGTATTGTTCAAAATCCAACAAGAAAAACCTTCAAAGTTCAGATGCTGAGAAAGGGGTTGGTTTAGCTCCATTTTTGAGTAAATTTAGTTCTGTGAAGATGGTTGGTAAGAAAGGGTGTGTTCCAATAATTGACTATAAGCAAATAGAAAAATCCACTGGAAATTTCAAGGAAAGTAACATCTTAGGTGAGGGTGGTTTTGGATGTGTTTACAAGGCTCAGTTGGATGATAATTTGGATGTTGCCATCAAGATGTTGAACTGTGAAAATCAGTATGCTGAGAGAGAATTTGAGAATGAGGTGGATTTGTTAAGTAAAATTCAACATCCAAATGTAATTTCTCTACTGGGTTGTGGCAGTAATGAAAATTCAAGGTTTATTGTCTATGAGTTGATGCAAAATGGATCATTGGAAACTCAGTTACATGGACCTTCTCATGGCTCAGCATTGACTTGGCACATGAGGATGAAGATAGCTCTTGACACAGCAAGAGGTTTAAAATATCTACATGAGCACTGCTACCCTCAAGTGATCCATAGAGATCTGAAATCTTCTAATATTCTTTTAGATGCAAACTTCAATGCCAAGCTTTCTGATTTTGGTCTTGCAATTACTGATGGGTCCCAAAACAAGAATAACATTAAGCTTTCAGGCACATTGGGGTATGTAGCCCCAGAGTATCTTTTAGATGGTAAATTGACTGATAAAAGTGATGTATATGCTTTTGGAGTTGTGCTTCTTGAACTTCTGTTAGGAAGAAAGCCCGTGGAAAAACTGGCCCCGTCTCAATGTCAATCTATTGTTACATGGGCTATGCCACAGCTCACAGACAGATCCAAGCTTCCAAACATTGTGGATAATGTGATTAAGAATACAATGGATCCCAAGCACTTATACCAGGTTGCTGCTGTGGCTGTGTTATGTGTGCAACCAGAGCCATGTTACCGCCCCCTGATTGCAGATGTTCTACACTCCCTCATCCCTCTTGTACCTGTTGAGCTTGGAGGAACTCTCAGAGTTTCACAAGTTACGCAGCAACCTGCGAATTCTAGTTAA 1329 0.3883 MKILLIFLLILHKPIWIIASLVDPFVSSPQIPPFSPIHTTITMDASSPGIHVRDEQQKNDSHNKKVMVFVVASTALGAVILSLLSFWIYYTKYCSKSNKKNLQSSDAEKGVGLAPFLSKFSSVKMVGKKGCVPIIDYKQIEKSTGNFKESNILGEGGFGCVYKAQLDDNLDVAIKMLNCENQYAEREFENEVDLLSKIQHPNVISLLGCGSNENSRFIVYELMQNGSLETQLHGPSHGSALTWHMRMKIALDTARGLKYLHEHCYPQVIHRDLKSSNILLDANFNAKLSDFGLAITDGSQNKNNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKPVEKLAPSQCQSIVTWAMPQLTDRSKLPNIVDNVIKNTMDPKHLYQVAAVAVLCVQPEPCYRPLIADVLHSLIPLVPVELGGTLRVSQVTQQPANSS 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03210 442 Gene3D Phosphorylase Kinase; domain 1 115 222 - -
Car04g03210 442 Gene3D Transferase(Phosphotransferase) domain 1 223 422 - -
Car04g03210 442 SMART serkin_6 147 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g03210 442 ProSitePatterns Protein kinases ATP-binding region signature. 153 175 IPR017441 GO:0005524
Car04g03210 442 ProSiteProfiles Protein kinase domain profile. 147 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g03210 442 PANTHER OS01G0750732 PROTEIN 35 438 - -
Car04g03210 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
Car04g03210 442 SUPERFAMILY Protein kinase-like (PK-like) 128 417 IPR011009 -
Car04g03210 442 PANTHER BNAA04G14780D PROTEIN 35 438 - -
Car04g03210 442 Pfam Protein tyrosine and serine/threonine kinase 150 385 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03210 Car-Chr4 60468138 60472875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03210 54 421 Receptor kinase-like Gene Family AT3G58690 43.316 1.90e-99 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Car04g03210 PK_Tyr_Ser-Thr 2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03210 - - gmx:100812044 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03210 04 60468138 60472875 Car05g02927 05 74262624 74266389 PCT