Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03208 ATGGCTGGGCAATCGGACCATGAGCTCTCACTGTTTTCAGCCGAGGAGCTTGAGTTCATCGCTGAGGACGAGATTGTGGACATCGTGCCTAATCTCAAAATGGATCCACTCTGTCTCATCTCTGGAGATTTTGGCCCATTTACGCCACAAATTGTTACTCAAGTACCGCTTTGGTTGGCCATTGCTCTCAAGAAGAGAGGCAAGTGTTCCATTTGCCCTCCCCAATGGATGACTGTTGAGAAGTTGACTCAAGTGTTGGAGGTAGAGCGAGACTCTCAAGAGATGTCGGAACATTTGCCATTTCATTATGTAGAAATCTCAAGACTTCTTTTTGACCATGCACGTGACAACATCCCTGACGCATACATGGTGAGGTCTCTAATTGAGGACATCAGAGATGTAAGGTTTCATAAAGTTGAAACTGACTTGGAGGGATTCAATGGTCGTACAATAGCCGTGAAGATAAAAAATTTATCTGCAATGGAAGTGAACATTGTTCGCCCATTTATTGGAAGAGCTTTACAAGCATTCTACAAGCATGATAGTTCAGAGTTGATCCCAGACCCAGAGCGAGCTCCTGATAGACGGCCGCAAGTTGCCCACAATGCCCCAAGAAGGCAACTACGAAGATAA 633 0.4534 MAGQSDHELSLFSAEELEFIAEDEIVDIVPNLKMDPLCLISGDFGPFTPQIVTQVPLWLAIALKKRGKCSICPPQWMTVEKLTQVLEVERDSQEMSEHLPFHYVEISRLLFDHARDNIPDAYMVRSLIEDIRDVRFHKVETDLEGFNGRTIAVKIKNLSAMEVNIVRPFIGRALQAFYKHDSSELIPDPERAPDRRPQVAHNAPRRQLRR 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03208 210 PIRSF GINS_PSF2 2 210 IPR007257 GO:0005634|GO:0006260
Car04g03208 210 MobiDBLite consensus disorder prediction 185 201 - -
Car04g03208 210 SUPERFAMILY GINS helical bundle-like 73 182 IPR036224 -
Car04g03208 210 CDD GINS_A_psf2 66 184 - -
Car04g03208 210 Gene3D - 12 77 - -
Car04g03208 210 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 1 192 IPR007257 GO:0005634|GO:0006260
Car04g03208 210 Pfam GINS complex protein 53 162 IPR021151 -
Car04g03208 210 Gene3D - 78 186 - -
Car04g03208 210 SUPERFAMILY PriA/YqbF domain 12 71 - -
Car04g03208 210 MobiDBLite consensus disorder prediction 185 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03208 Car-Chr4 60442000 60448416 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03208 1 146 Core DNA Replication Machinery Family AT3G12530 67.808 3.62e-72 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03208 K10733 - gmx:100780528 376.326