Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03160 ATGTCTGCATCTGCAGCAATCATTGCGGCTCATTCCAGTTCTTGGGCTGCAGCTCTCGTTAAGATCTCTCCTTACACCTTTTCCGCTATCGGTATCGCCATCTCAATTGGCGTCTCCGTTCTCGGCGCTGCTTGGGGAATTTACATTACCGGTAGTAGTTTGATCGGTGCTGCAATTAAGGCTCCCCGAATCACTTCCAAAAATCTCATTAGTGTAATCTTCTGTGAAGCTGTTGCTATATATGGTGTTATTGTAGCTATTATCCTGCAGACAAAATTAGAAGCCGTTCCAAAAGCAAGTATCTACGCACCCGAATCTATGAGAGCTGGATATGCAATCTTTGCTTCTGGAATCATCGTTGGCTTCGCAAATCTCGTTTGTGGGTTGTGTGTAGGAATAATTGGAAGCAGCTGCGCATTGTCTGATGCTCAAAACTCAACTCTCTTTGTGAAAATTCTTGTGATTGAGATCTTCGGTAGTGCGCTTGGCCTATTCGGAGTTATTGTTGGAATTATTATGTCAGCTCAAGCAACATGGCCCTCAAAAGTTTAG 552 0.4402 MSASAAIIAAHSSSWAAALVKISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLEAVPKASIYAPESMRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPSKV 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03160 183 SUPERFAMILY F1F0 ATP synthase subunit C 106 174 IPR035921 -
Car04g03160 183 CDD ATP-synt_Vo_c_ATP6F_rpt1 27 89 - -
Car04g03160 183 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 8 181 - -
Car04g03160 183 PANTHER V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNIT 8 181 - -
Car04g03160 183 Gene3D - 25 179 IPR035921 -
Car04g03160 183 SUPERFAMILY F1F0 ATP synthase subunit C 23 92 IPR035921 -
Car04g03160 183 CDD ATP-synt_Vo_c_ATP6F_rpt2 109 173 - -
Car04g03160 183 Pfam ATP synthase subunit C 114 173 IPR002379 GO:0015078|GO:0033177|GO:1902600
Car04g03160 183 Pfam ATP synthase subunit C 30 89 IPR002379 GO:0015078|GO:0033177|GO:1902600
Car04g03160 183 PRINTS Vacuolar ATP synthase 16kDa subunit signature 43 67 IPR000245 GO:0033179|GO:0046961|GO:1902600
Car04g03160 183 PRINTS Vacuolar ATP synthase 16kDa subunit signature 69 93 IPR000245 GO:0033179|GO:0046961|GO:1902600
Car04g03160 183 PRINTS Vacuolar ATP synthase 16kDa subunit signature 125 151 IPR000245 GO:0033179|GO:0046961|GO:1902600
Car04g03160 183 PRINTS Vacuolar ATP synthase 16kDa subunit signature 152 175 IPR000245 GO:0033179|GO:0046961|GO:1902600
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03160 8 182 Primary Pumps ATPases(2) AT2G25610 91.429 1.17e-110 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03160 K03661 - cpap:110811363 296.204