Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03157 ATGGAGAGAAATGACACTAAAATTTGGAGAAACCATTGCATGGATGTTTTCTCAAAATCTGAACGTGAAGATGATGAAAAAGCTTTGAAGTGTGTTGCAATAGAAAGAGTTCTTAAACGTGCATGCTTTAGGAGAAGTGTAGAGACCAAAGATGAAGGTAAAGAAAAAGAAATTGAGACTATGCAACTTGAATTGGTAGAGAAAAGGGATTTGCTAGAGAGACTTGTGAAAATTGCTGAAGAAGATAATGAAAATTTCTTATTGAAAATTAGAGAAAGAATGGACAGAGTTGGACTTGAACTTCCAACAATAGAAGTTCGATTTGAGGACATAAATGTGGACGCACAAGTTTATGTTGGAAGCAGAGCATTGCCTACATTACTTAACTTCTTTGTAAATGTGATAGAGGGGTTTCTGAATTATGTTCAAATAATTCCAAGTCCAAAGAAACAGTTATGTATCCTTCAGAATGTTAGTGGAATCATAAAGCCTAGAAGaatgacattgcttttagggccaccaggctctggtaagaccactttgcttttggccttggctggaaaacttggtaaagatgtaaaacattttgggagagtaacatataatggagaaggactagaagagtttgttccacaaaggatatcagcttatataagtcaatatgataatcacattggagaaatgactgtcagagaaacactagctttctcagcaagatgtcaaggagttggaCATAATTACGAAATGTTGACTGAACTACTGagaagagagaaggaagcaatgattgaaccagattctgatattgatgcctatatgaagGAAGCAGCAATAGAAGGACAACAAATCAGTGTGGTCATTGACTACATTCTCAAGattttaggacttgaagtttgtgctgacataatggtaggagatcaaatgataagaggtatctcgggaggggagaaaaagcgactcactacaggtgagatgctggttggacctataaaggtgttattcatggatgagatatcaaatggtttggacagttcaacaacttttcagatagtcagctcaataaagcaatccgtccatattctaaatggaactgcacttgtgtcattgctacaaccagcaccagaaacttatgaattatttgatgatataatacttctcacagatggacaaattgtgtatcaaggaccaagagaaaatgtacttgagttttttgaatcaatgggattcaagtgtcctgaaagaaaaggagttgctgatttcttacaagaaGTGACATCAAGAAAAGATCAATGGCAATATTGGGCATGTAAAGATAAATCTTATAAATTTGTCACTGTCAAAGATTTCGCTCAAGCGTTCGAATCCTTTCACGTCGGTCAACAACTTAGAGAAGATCTTGCCGATCCTTTCAACAAGACTAAGTTTCATTCAAATGTCTTGATCACAAAGAAATATGGTATTAACAAGAAGGAGCTGCTAAGAGCTTGTGCTAGCAGAGAATTATTGCTTATGAGGCGAAATTTGTTTGTCTACATATTCAAAGCAACCCAACTTACTTATTTAGCTACCTTGACGACGACATTATTTCTACGAAAGAAGATGTACCACTCTACCATTGAAGATGCAGAAACTTACATGggagcactattcttcacagtcacagtagcaatgttcaatggaatatcagagctaaatatgacaatcatgaaacttcctgtgttttacaagcaaagagaccttcttttctatccttcatgggcttattcacttccgccatggatcctcaaaataccaataacactcgtagaggttgccatttgggaatgcatatcttactatgccattggctatgatccaaacattggaagGTTTTTTAAACAGTTCTTGGTAATCCTATGCATTAATCAGATGGCGTCCGCATTATTTCGGTTTATGGCAGCATTAGGAAGGGATATTGTAGTAGCAAACACATTTGGAACATTTTCACTACTTGCAGTTACAGTTTTGGGAGGATTTGTTATTTCAAGAGAGGATGTGAACAAATGGTTTTTGTGGGGTTATTGGTCGTCACCGTTGATGTATGGACAAAATGCTATTGCTGTGAATGAATTTCTTGGCCATAGTTGGAGAAAGGTTAAGCCTGATTCAAATGAAACCTTGGGAGTATTGATACTAAAATCTCGCGGATTTTTTCCAGAAGCTTATTGGTATTGGATTGGAATTGGAGCTTTGATTTGTTATGTTTTTCTATTTAATTTTCTCTTCGCATTGGCTTTGCATTGTCTCAGTCCATTCAGAAAGGATCAAGCTGGCTTATCCCAAGAGAAATTGCAAGAGAGAAATGCTTCAACAGCTGAAGAGTTGATTCAATCACAAACACAAAAGAGCTCTTCTGATAAAAAGATGGATGAAGTTGATCTATCATCCAAGTCGTATACCAAAAGAGTTGACAAAAACAAAGCTAACGGTAGTGGAAGAAGAGGCATGGTTCTTCCTTTTGAACCTTTATCCCTCACTTTTGATGATATCAGATATTCTGTCGACATGCCACAGgaactgaaaagtcaaggagtttttgaggatcgtcttgaacttttgaagggtgttagtggtgcttttagaccaggagtgctaacagctctaatgggtgtaagtggtgctggaaagactactctacttgatgttttagctggaagaaaaactagtggatatattgaaggaagcatcacaatatctggctatccaaagagtcaaaaaacatttgctcgcatatcaggatattgcgaacaattcgatatccactcgcccaatgttacagtctatgaatctttggtatattctgcatggcttcgTTTATCCCCTGAAGTCGATCGTGCAACTAGAATGatgttcgttgaggaagttatggagcttgtagagcttaactcattaagacaggcacttgttggattgccaggcgagaacggactttcaactgaacaacgcaagaggcttacaattgcagttgaactagttgccaatccgtcgataatattcatggacgaaccaacctccggccttgatgctagagcagctgcaattgtaatgagaacagtaaggaacaccgtggacaccggacgtaccgtggtgtgcacgatccatcagccaagtattgacatatttgacgcctttgatgagatgctacttctgaagttaggaggggagcagatatatgccggtccaataggcgaccattgttccaatctgatccagtactttgaggctattgaaggagttcctaagatcaaagatggttataatcctgcaacttggatgttggaagttacatcagctggaaaagaggcaaatcttaaggtcaatttcactgatgtgtacaaaaactcagaactacatcggagaaataaacaattaatccaggagcttagttttccttgtcaaggttcaaaagatctacactttgatgctcaatattcacagacatttgtagcacaatgtatagcttgtctatggaaacaacatttgtcatattggaggaatacatcatatacagcagttagactcctatttactataatgacaggtttattgtttggcctgattttttgggaTGTTGGCTTGAAAAGTCACAGGAGAaaggagcaagatttattcaatgcaatgggatcaatgtatgctgctgttaccttcataggggttgtaaatggtgcctcagtgcaaccaatagtagcaattgagagaacagtcttctatagagaaagagctgcagggatgtattcagctttgccatatgctcttgcacagGTTATTATAGAGCTTCCCCACATCTTGGTTCAGGCTCTTGTATATGGGATCATAGTATATGCCATGATGGGATTTGAGTGGACAACATCAAAAGTTTTGTGGAATCTCTTCTTCACCTACTTTAGTTTCTTATATTATACCTACTATGGTATGATGACAATGGCCATAACTCCAAATCCACATGTTGCTGGCATATTATCCACCTCATTCTATGCAATATGGTGCCTTTTCTCAGGCTTCATCATTCCCTTATCTagaataccaatatggtggaagtggtactattgggtttgtcctgttgcatggacattgtatggattggtggcttcacaatatggtgacaacatggacacacttgagaatggtcaaagggttgaagaatttgtgaagagttactttggttttgaacatgacttcctaggaatggttgcaattgttgtggctagtttctcagtgttgtttgcactcatcttcacctttggtatcaaagcattcaacttccaaaaaagatga 4311 0.1672 MERNDTKIWRNHCMDVFSKSEREDDEKALKCVAIERVLKRACFRRSVETKDEGKEKEIETMQLELVEKRDLLERLVKIAEEDNENFLLKIRERMDRVGLELPTIEVRFEDINVDAQVYVGSRALPTLLNFFVNVIEGFLNYVQIIPSPKKQLCILQNVSGIIKPRRMTLLLGPPGSGKTTLLLALAGKLGKDVKHFGRVTYNGEGLEEFVPQRISAYISQYDNHIGEMTVRETLAFSARCQGVGHNYEMLTELLRREKEAMIEPDSDIDAYMKEAAIEGQQISVVIDYILKILGLEVCADIMVGDQMIRGISGGEKKRLTTGEMLVGPIKVLFMDEISNGLDSSTTFQIVSSIKQSVHILNGTALVSLLQPAPETYELFDDIILLTDGQIVYQGPRENVLEFFESMGFKCPERKGVADFLQEVTSRKDQWQYWACKDKSYKFVTVKDFAQAFESFHVGQQLREDLADPFNKTKFHSNVLITKKYGINKKELLRACASRELLLMRRNLFVYIFKATQLTYLATLTTTLFLRKKMYHSTIEDAETYMGALFFTVTVAMFNGISELNMTIMKLPVFYKQRDLLFYPSWAYSLPPWILKIPITLVEVAIWECISYYAIGYDPNIGRFFKQFLVILCINQMASALFRFMAALGRDIVVANTFGTFSLLAVTVLGGFVISREDVNKWFLWGYWSSPLMYGQNAIAVNEFLGHSWRKVKPDSNETLGVLILKSRGFFPEAYWYWIGIGALICYVFLFNFLFALALHCLSPFRKDQAGLSQEKLQERNASTAEELIQSQTQKSSSDKKMDEVDLSSKSYTKRVDKNKANGSGRRGMVLPFEPLSLTFDDIRYSVDMPQELKSQGVFEDRLELLKGVSGAFRPGVLTALMGVSGAGKTTLLDVLAGRKTSGYIEGSITISGYPKSQKTFARISGYCEQFDIHSPNVTVYESLVYSAWLRLSPEVDRATRMMFVEEVMELVELNSLRQALVGLPGENGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDEMLLLKLGGEQIYAGPIGDHCSNLIQYFEAIEGVPKIKDGYNPATWMLEVTSAGKEANLKVNFTDVYKNSELHRRNKQLIQELSFPCQGSKDLHFDAQYSQTFVAQCIACLWKQHLSYWRNTSYTAVRLLFTIMTGLLFGLIFWDVGLKSHRRKEQDLFNAMGSMYAAVTFIGVVNGASVQPIVAIERTVFYRERAAGMYSALPYALAQVIIELPHILVQALVYGIIVYAMMGFEWTTSKVLWNLFFTYFSFLYYTYYGMMTMAITPNPHVAGILSTSFYAIWCLFSGFIIPLSRIPIWWKWYYWVCPVAWTLYGLVASQYGDNMDTLENGQRVEEFVKSYFGFEHDFLGMVAIVVASFSVLFALIFTFGIKAFNFQKR 1436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03157 1436 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 860 1080 IPR027417 -
Car04g03157 1436 Gene3D - 142 451 IPR027417 -
Car04g03157 1436 PANTHER ATP-BINDING CASSETTE TRANSPORTER 4 1436 - -
Car04g03157 1436 Pfam ABC-2 type transporter 1163 1378 IPR013525 GO:0016020|GO:0140359
Car04g03157 1436 Pfam ABC-2 type transporter 491 703 IPR013525 GO:0016020|GO:0140359
Car04g03157 1436 Pfam ABC-transporter N-terminal 60 130 IPR029481 -
Car04g03157 1436 MobiDBLite consensus disorder prediction 782 805 - -
Car04g03157 1436 CDD ABCG_PDR_domain2 834 1072 IPR034003 -
Car04g03157 1436 SMART AAA_5 874 1066 IPR003593 -
Car04g03157 1436 SMART AAA_5 164 396 IPR003593 -
Car04g03157 1436 Gene3D - 851 1088 IPR027417 -
Car04g03157 1436 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 412 IPR027417 -
Car04g03157 1436 Pfam ABC-2 type transporter 370 421 IPR043926 GO:0140359
Car04g03157 1436 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 139 412 IPR003439 GO:0005524
Car04g03157 1436 Pfam Plant PDR ABC transporter associated 708 769 IPR013581 -
Car04g03157 1436 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 837 1090 IPR003439 GO:0005524
Car04g03157 1436 Pfam ABC transporter 865 1017 IPR003439 GO:0005524
Car04g03157 1436 Pfam ABC transporter 155 338 IPR003439 GO:0005524
Car04g03157 1436 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 4 1436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03157 Car-Chr4 59825330 59834988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03157 862 1049 Calmodulin-binding Proteins AT2G36910 25.000 4.51e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03157 K08711 - gmx:100810505 2358.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02988 05 74783072 74790784 Car04g03157 04 59825330 59834988 PCT