Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03150 ATGAAAAATAAATTTAATTATCCATTGGATTTTGTAAGTTTAAACCGTGACTTGTCTCCCGCTCCGATTTTTATTATCACTCCTTCTTTTCATCTTCCACACACACACACTtctactttctctctcatcctttctctctctctctctctcCATGAATATTTTTTAACACTACTCATGAGGGAATGCAAAATGAAGAATAAAGAAAATGAAGGTGTGAATGTGAGGGTGACTCGAGCAAGGGCAAGAGCCATGAAAGCTTCTTCAACaaaccaaaaccaaaaccaaaaccaaaaTGTTGTTGGAGTTGGCCTCACAGATGTAACTAACTCATCACATCTTAAACGTTTTCAGACGTCAAATTTTCAGGAAAAAGAAGGTTGTAAGAAGAGAAAGACCAAGGTAGCTTCAGATCGTGTACCCTTACAAGTTTTGACAACCCAAGAAGATGTTAAGACAGAGTTAGCTAAAGAAGATTCATCTAAAAAAGAGATGAAAGTGTCATTGCAACCCTCAGTTGAAATGGAATCTCTCCTGCTTTTAACGCAGGACTCTGTCAGCTCTCCAAATAAAGACGTAAATATGATATGTGAGAAACTAAGAGCCTCAGCTGGCTTGGGAATTGTGGACATTGATTCAGAGTTAAGGGAAAAGGATCCTCTAATTTGGAGTTCTTATGCCCCAGATATATATAATACTATACATGTCAGAGAGTGTGAAAGGAGACCATTAGCCAATTACATGGAAAAGTTGCAGCAAGACATCAATCCAAAAATGAGGGCAATTCTGGTTGATTGGCTTGTGGAGGTTTCTGAGGAATATAAACTAGTTCCGGACACACTTTACCTTACAGTGAATCTCATTGATCGGGTCCTTTCCCAACGTTTGATAACAAAACAAAGGCTCCAGTTGCTTGGTGTTGCTTGCATGCTAACTTCTTCTAAGTATGAAGAGATTACTGCTCCTCAAATAAAAGAGTTCTGCTTCATCACAGATTATACATACTCAAAAGAAGAGATACTGAAAATGGAGAGAGAGGTACTAAATCTTCTGAATTTTCAATTAGCTGTTCCTACGATCAAAACATTTCTCAGGAGGTTCATCCAAGTAGCACAAACTTCGTACAAGGTTGTTTATGCTGAACTGGAATTCCTGGCAAATTATTTGGCAGAGCTTTCTCTTGTTGAATACAGCTTCTTGCAGTTTCTACCTTCCAAGATAGCTGCATCTGCTGTATTACTAGCCAGATGGACTCTCCACCAGTCAGAACATCCATGGAATCCAACTCTAGAGCACTATACAAATTACAAAGCCTCAGAGCTTAAAAATACTGTCCTTGCACTTTTAGATTTGCAGCTTAACACAGAAGGCTGTTGTCTGAATGCTGTGCGCGAAAAATATAAACAACAGAAGTTCAAAAGTGTGGCAAATTTGTCTGCGAAACCCGTGGAATCTCTTTTCTAA 1461 0.3696 MKNKFNYPLDFVSLNRDLSPAPIFIITPSFHLPHTHTSTFSLILSLSLSLHEYFLTLLMRECKMKNKENEGVNVRVTRARARAMKASSTNQNQNQNQNVVGVGLTDVTNSSHLKRFQTSNFQEKEGCKKRKTKVASDRVPLQVLTTQEDVKTELAKEDSSKKEMKVSLQPSVEMESLLLLTQDSVSSPNKDVNMICEKLRASAGLGIVDIDSELREKDPLIWSSYAPDIYNTIHVRECERRPLANYMEKLQQDINPKMRAILVDWLVEVSEEYKLVPDTLYLTVNLIDRVLSQRLITKQRLQLLGVACMLTSSKYEEITAPQIKEFCFITDYTYSKEEILKMEREVLNLLNFQLAVPTIKTFLRRFIQVAQTSYKVVYAELEFLANYLAELSLVEYSFLQFLPSKIAASAVLLARWTLHQSEHPWNPTLEHYTNYKASELKNTVLALLDLQLNTEGCCLNAVREKYKQQKFKSVANLSAKPVESLF 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03150 486 Pfam Cyclin, N-terminal domain 228 354 IPR006671 -
Car04g03150 486 Gene3D - 228 476 - -
Car04g03150 486 SUPERFAMILY Cyclin-like 217 354 IPR036915 -
Car04g03150 486 Pfam Cyclin, C-terminal domain 357 478 IPR004367 -
Car04g03150 486 SUPERFAMILY Cyclin-like 356 478 IPR036915 -
Car04g03150 486 SMART Cyclin_C_2 357 480 IPR004367 -
Car04g03150 486 PANTHER CYCLIN-A2-4 103 486 - -
Car04g03150 486 PANTHER CYCLINS 103 486 IPR039361 -
Car04g03150 486 SMART cyclin_7 264 348 IPR013763 -
Car04g03150 486 SMART cyclin_7 361 449 IPR013763 -
Car04g03150 486 CDD CYCLIN 356 448 IPR013763 -
Car04g03150 486 CDD CYCLIN 258 347 IPR013763 -
Car04g03150 486 ProSitePatterns Cyclins signature. 259 290 IPR006671 -
Car04g03150 486 Gene3D - 242 355 - -
Car04g03150 486 PIRSF Cyclin_A_B_D_E 56 485 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03150 Car-Chr4 59684710 59690118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03150 73 486 Core Cell Cycle Gene Families AT5G25380 50.000 1.90e-126 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03150 K06627 - gmx:100777132 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03150 04 59684710 59690118 Car05g02998 05 74854769 74861076 PCT