Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03141 ATGGAAGTGAAGGGTATTGTACTTTTAACAATAATTGTTGCATTATTGTCCTTCGTAGGATCAGTTTCATCAACACAATTCCTAACTGGCTGCAATTACACTTGTGGAAATTCTAAAATTCCATATCCATTTGGCATAGGAAATTCAACAGAACAAGGTAATGCACCATGTTACTTGGATCCTAAGTTTGAGCTATCTTGTGTAAACAACTCAATACTATATATAGGTAACTTACAAGTCTTAGATATAGACATCCTCCATACCCAAATGGAAGTTTTATTTTATGTCTCAAAATATTACGGTTACGAATATGAAGAAAACACTAAACCAACACTCAACACAGAATGGTTAAGCATTTCAAGCAAGGAAAACAAGTTTATAACTGTTGGTTGTGACAGTTATGGTTATCTAGATAGCACTTATAACAGTAACACATATTCAACAGGGTGTTTAACAAGATGTCATGGAAATGAAATGTTTGATAATGGAACATGTTCTGGTATAGGTTGCTGCCAAGTTGATATTCCTTCTAGAATGAGGAACATCACTGTAGAAGCTTTTTCCTTCAATGAGTCATTGTTACCTTCAAGAATCTGCAGAACCTATTCATTTGTTGTTAAGAATAATAACTACAGTTTTTCATCCACTCATTTGAAAGGTTTACCTTTCAAAGAAGTACCAATAGTTCTTGACTGGCATGTAGGTGAGTTTGAAGATAACTGCAGTACTGTTTCCAAGAAGAACTATGCATGCATGAACAATAGCTTCTGTGATGACAAGCACACTGATTTTGGTTACCGATGCAAATGCAACAAAAATTATGAAGGAAACCCTTATCATCCTGATGGCTGCACAGATATTAATGAATGTGAAACACCAAATCATGGTGGATGCAAAAGTAAAGCAAATTGTAATAACAGTGATGGGAATTACAATTGTTTCTGTCCTGTGGGGCAATTTGGAGATGGAACAAAGGGTGGAACAGGATGCCAGCCTGTCAAGCCACATGATAGAAATGGATATCTAATGTTACTTACTCTTATTGGAGTTGGAGCAGTATTAATTGTTGTATTTGTGGGGATAATTTTGTACTCAATATACCAGAAAAGTAGACTAATCAAATTGAAAAAGAAATTCTATAAGCAGAATGGAGGTTCAATTTTGGAACAGAAACTTGGTCAAAGAAAAGACTCCTCTCAAATAGCTCATATTTTCAGTGAAAGTGAAATAAGAAAGGCCACTAACAACTATGATGAAAGCTTAATCATAGGTAGAGGAGGTTTTGGTACAGTTTTCAAAGGTGAACTAGCAGATAATACAATTGTTGCTGTCAAGAAATCCAAAACAATAGATGCAAGCCAAATTGATCAATTCATTAATGAGGTGGATGTTGTGTCTCAAATAAATCATAGGAATGTGGTCAAACTCTTAGGGTGTTGTCTAGAAACACAAGTTCCATTGTTGGTTTATGAATTTATTACCAATGGTACTCTTTCTGATTTTATACACACACAAGTTAAGGTGAATAATGAAACTTGGAAAACTCGTCTTAAGATAGCAGCTGAGGTAGCTGGAGCTTTGTCATATCTACATTCAGCTGCCACAATACCAATTATTCATAGAGATGTTAAGAGTGATAATATTCTCTTGGATGGAACCGACACTGCCAAAGTATCTGATTTTGGAGCTTCAAGGTTGGTTCCACTTGATCAAACTGAGGTAGCCACAATGGTGCAAGGGACAATTGGGTACTTAGATCCAGAGTATATGCAAACAAGCCAATTGACTGAAAAAAGTGATGTCTATAGTTTTGGTGTAGTTCTTGTGGAGCTGTTAACAGGTGAGAAACCTTTTTGTTTTGGTAGACCAGAAGAGACAAGAAATCTTGCTATGTACTTCTTGTCTTTCTTGAAAAAGGGTAGTTTGTTTCAAGTTATTCAAGGTGGCATGTTGAATGAAGGAAACAAGCAGGAGATCAAGGAGGTTGCTATTCTTGCAGCTGAGTGTTTGAGAGTTAAAGGAGAGGAAAGACCTACCATGAAGGAAGTGGCTATGGAATTGGAGGGAATGAGACTAATGGAGAAGCACTCTTGGATCAATGAAGACATAAATGTTGAGGAGAGTCACTACTTGCTCAATGAATCATCATCTAGCATTTATGAACATGGTGATAGCAGCAAACATGGAGATATTGGGTATGACAGCTTAAAAGATCATGCACTAATTGTCATGGATGATGGAAGATGA 2247 0.3627 MEVKGIVLLTIIVALLSFVGSVSSTQFLTGCNYTCGNSKIPYPFGIGNSTEQGNAPCYLDPKFELSCVNNSILYIGNLQVLDIDILHTQMEVLFYVSKYYGYEYEENTKPTLNTEWLSISSKENKFITVGCDSYGYLDSTYNSNTYSTGCLTRCHGNEMFDNGTCSGIGCCQVDIPSRMRNITVEAFSFNESLLPSRICRTYSFVVKNNNYSFSSTHLKGLPFKEVPIVLDWHVGEFEDNCSTVSKKNYACMNNSFCDDKHTDFGYRCKCNKNYEGNPYHPDGCTDINECETPNHGGCKSKANCNNSDGNYNCFCPVGQFGDGTKGGTGCQPVKPHDRNGYLMLLTLIGVGAVLIVVFVGIILYSIYQKSRLIKLKKKFYKQNGGSILEQKLGQRKDSSQIAHIFSESEIRKATNNYDESLIIGRGGFGTVFKGELADNTIVAVKKSKTIDASQIDQFINEVDVVSQINHRNVVKLLGCCLETQVPLLVYEFITNGTLSDFIHTQVKVNNETWKTRLKIAAEVAGALSYLHSAATIPIIHRDVKSDNILLDGTDTAKVSDFGASRLVPLDQTEVATMVQGTIGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTGEKPFCFGRPEETRNLAMYFLSFLKKGSLFQVIQGGMLNEGNKQEIKEVAILAAECLRVKGEERPTMKEVAMELEGMRLMEKHSWINEDINVEESHYLLNESSSSIYEHGDSSKHGDIGYDSLKDHALIVMDDGR 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03141 748 ProSitePatterns Calcium-binding EGF-like domain signature. 286 313 IPR018097 GO:0005509
Car04g03141 748 Gene3D Phosphorylase Kinase; domain 1 382 492 - -
Car04g03141 748 SMART egfca_6 286 331 IPR001881 GO:0005509
Car04g03141 748 SMART egf_5 240 285 IPR000742 -
Car04g03141 748 SMART egf_5 289 331 IPR000742 -
Car04g03141 748 ProSitePatterns Protein kinases ATP-binding region signature. 423 446 IPR017441 GO:0005524
Car04g03141 748 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 304 315 IPR000152 -
Car04g03141 748 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Car04g03141 748 ProSiteProfiles EGF-like domain profile. 286 325 IPR000742 -
Car04g03141 748 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 19 717 - -
Car04g03141 748 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 19 717 IPR045274 GO:0007166
Car04g03141 748 CDD STKc_IRAK 423 690 - -
Car04g03141 748 ProSiteProfiles Protein kinase domain profile. 417 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g03141 748 Pfam Wall-associated receptor kinase galacturonan-binding 31 90 IPR025287 GO:0030247
Car04g03141 748 Pfam Protein tyrosine and serine/threonine kinase 423 687 IPR001245 GO:0004672|GO:0006468
Car04g03141 748 SMART serkin_6 417 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g03141 748 SUPERFAMILY Protein kinase-like (PK-like) 399 688 IPR011009 -
Car04g03141 748 ProSitePatterns Serine/Threonine protein kinases active-site signature. 538 550 IPR008271 GO:0004672|GO:0006468
Car04g03141 748 Gene3D Transferase(Phosphotransferase) domain 1 493 712 - -
Car04g03141 748 Gene3D Laminin 238 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03141 Car-Chr4 59583949 59586791 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03141 1 748 Receptor kinase-like Gene Family AT1G21230 42.283 0.0 547
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Car04g03141 PK_Tyr_Ser-Thr 1.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03141 - - mtr:MTR_1g010260 898.656