Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03116 ATGGTTTTGTCTGTTACAATGGCTATTAGTTCTCATAGGTTTTCACATCAAGGTGCAATCACAAAAGGAATGACAGCTATTGAAGAAATGGTTGGAATGGATGTTCTTTGCAGTGGTAAAATTAGAACTCTCATTTTGAATAAGTTTAGTGGTGATAGAAAATTGATTGAGGTGTTTGTTAAGGGTGTAGATAAGGACTTTGTGATACTTTTAGCAGCTAGAGCTTCTAGGATTGAAAATCAGGATGCTATTGATGCTGAAGTTGTTGGAATAAATGATCATAAAGGTTTTAGCGGAGATAAGTAA 306 0.3464 MVLSVTMAISSHRFSHQGAITKGMTAIEEMVGMDVLCSGKIRTLILNKFSGDRKLIEVFVKGVDKDFVILLAARASRIENQDAIDAEVVGINDHKGFSGDK 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03116 101 Gene3D - 1 33 - -
Car04g03116 101 Gene3D - 34 48 IPR023214 -
Car04g03116 101 Gene3D - 49 91 IPR023299 GO:0000166
Car04g03116 101 PANTHER CALCIUM-TRANSPORTING ATPASE 2 91 - -
Car04g03116 101 PANTHER PLASMA MEMBRANE ATPASE 2 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03116 Car-Chr4 59277951 59278256 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03116 2 91 Primary Pumps ATPases AT3G47950 74.444 1.45e-38 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03116 K01535 - bvg:104886535 134.42