Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03109 ATGCCAGGATTATCTTGCAACGCTTGCAACACCGAATTCAACGATGACGCAGATCAAAAGCTTCATTACAAATCCGAGTGGCATCGCTACAATCTCAAACGCAAGGTGGCTGGGGTTCCCGGGGTGACAGAAGCATTGTTTCTAGCTAGACAATCTGCACTTGCTCTAGAGAAAGATAAATCTAATGAAACCCCTATGCTCTATAGCTGTGGCCTATGTGGTAAGGGTTATAAAAGCTCTAAAGCTCATGCCGAGCATCTTAAGTCGAGAACTCATATGATGCGGGCTTCTGAAGGAGCTAGTCATTCTGATGGGAAGGCTATAATTAAGCCACTTCCACAACGCGTTGTGAATAAGCCTCCTCCTAGAAAAGTGCCAGATAACTCTGCTGAAAGTGAAGAAAGTGAAGATGAATGGGAGGAGGTTGGTTCCGATGATGATCTTATTGATGCTGCTGCAAAGTCCTTGACAGATatgaacatggacgagaatgctgataatgatgatatggatgaagatgatgatgTCGGAGAGGACTTAGATCCGTCGTGTTGCTTTATGTGTGATCAAGAGCACAAAACAATTGAAAACTGCATGGTTCACATGCACAAGCACCATGGATTCTTCATTCCTGATGTTGAGTATCTGAAAGATCCGAAAGGGCTCCTCACTTATCTTGGACTGAAGGTCAAAAGGGATTACCTGTGTCTGTACTGCAATGATCGGTGTCATCCTTTCAGCAGCTTGGAAGCAGTCAGGAAACATATGGCAGCTAAAAATCACTGTAAAGTGCATTATGGTGATGACGATGATGAGGAGGAAGCAGAGTTGGAAGAATTCTATGATTATACCAGCAGTTATGTTGATGATCAAGGGAAGCAGCTGGTTGTATCCGGTGATGGGGATAATAATATAGAACTTAGTGATGGGTCTGAGCTCGTAATTACTAAGATGTCTGGTGATAGAAAATCAACCAGAACTCTAGGTTCCCGTGAATATTTGCGCTATTATCGTCAGAAACCACGGCCATCACCAGAAAACAACAATGCCATCACTGCTGCATTGGCTTCAAGGTACAGAAGCATGGGTTTGGCCACTGTCCAATCAAGGGAGCACTTTGTGAGGATGAAAATCTTGAAGGAGATGAACAAGTCAGGTGTGGAGCATATGCGTAGCAAGATGGGGATGAAGAGCAATGTCATCCGGAACCTGCCAAACAATGTCACATATTAG 1233 0.4234 MPGLSCNACNTEFNDDADQKLHYKSEWHRYNLKRKVAGVPGVTEALFLARQSALALEKDKSNETPMLYSCGLCGKGYKSSKAHAEHLKSRTHMMRASEGASHSDGKAIIKPLPQRVVNKPPPRKVPDNSAESEESEDEWEEVGSDDDLIDAAAKSLTDMNMDENADNDDMDEDDDVGEDLDPSCCFMCDQEHKTIENCMVHMHKHHGFFIPDVEYLKDPKGLLTYLGLKVKRDYLCLYCNDRCHPFSSLEAVRKHMAAKNHCKVHYGDDDDEEEAELEEFYDYTSSYVDDQGKQLVVSGDGDNNIELSDGSELVITKMSGDRKSTRTLGSREYLRYYRQKPRPSPENNNAITAALASRYRSMGLATVQSREHFVRMKILKEMNKSGVEHMRSKMGMKSNVIRNLPNNVTY 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03109 410 PANTHER ZINC FINGER PROTEIN-RELATED 1 410 - -
Car04g03109 410 MobiDBLite consensus disorder prediction 94 146 - -
Car04g03109 410 ProSiteProfiles Zinc finger C2H2 type domain profile. 68 97 IPR013087 -
Car04g03109 410 ProSitePatterns Zinc finger C2H2 type domain signature. 70 92 IPR013087 -
Car04g03109 410 SUPERFAMILY beta-beta-alpha zinc fingers 4 36 IPR036236 -
Car04g03109 410 SUPERFAMILY beta-beta-alpha zinc fingers 168 244 IPR036236 -
Car04g03109 410 SUPERFAMILY beta-beta-alpha zinc fingers 67 97 IPR036236 -
Car04g03109 410 SMART c2h2final6 234 261 IPR013087 -
Car04g03109 410 SMART c2h2final6 68 92 IPR013087 -
Car04g03109 410 SMART c2h2final6 183 205 IPR013087 -
Car04g03109 410 SMART c2h2final6 4 28 IPR013087 -
Car04g03109 410 Pfam C2H2 type zinc-finger (2 copies) 185 286 IPR041661 -
Car04g03109 410 ProSitePatterns Zinc finger C2H2 type domain signature. 6 28 IPR013087 -
Car04g03109 410 PANTHER ZINC FINGER PROTEIN 622 1 410 IPR040025 -
Car04g03109 410 SMART ZnF_U1_5 1 35 IPR003604 GO:0003676|GO:0008270
Car04g03109 410 MobiDBLite consensus disorder prediction 131 146 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03109 1 410 C2H2 Transcription Factor Family AT4G31420 63.614 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03109 K14816 - gmx:100796317 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03109 04 59228576 59231641 Car04g03109 04 59228576 59231641 ECH