Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03096 ATGGCTGGTTCTGGCTCCGGTTCTGTTAGTTGCAAAAGTGATAGTAGAATTGAGAATTTGATTTGTGCTACTAAATCATTGAAACTTAGCTTAGAGAAATCAAAGAGTGTAGGGTTAGCATTAGATAAAGCAGGTCCAAGGTTAGATGAGATTAGGGTAAGGTTACCTTGGCTTGAATCGGCCGTTCGGCCGATTCGAGCTGAGAAGGATGCCCTTGTTGCGGTTGGCGGCCATATTAATAGGGCTGTTGGTCCTGCAGCTGCCGTGTTGAAGGTTTTCGATGCGGTTCATGGACTTGAGAAGTCTTTGTTGTCGGATCCGCGGATTGATCTCCCTGGTTATTTGTCGGTTTTGAAGCGCCTTGAGGAGGCACTGAGGTTCTTGGGAGATAATTGTGGGTTGGCTATTCAATGGTTGGATGATATAGTCGAGTATTTAGAGGATAACTCGGTTGCTGATCAGGTTTATCTTAAGAATTTGAAGAAGGAGTTGGAGAATCTTAAGGTATCGCAGAATGGTGATTTGGATGGTGGTTTGTTACAGGCTGCTTTGGATAAACTGGAGAATGAGTTTAGGTTGCTATTAACTGAAAACAGTGTGCCTCTTCCTATGTCGAATTCTCTTGGTGATCAGCCTTGTATTGCGCCTTCACCTTTGCCTGTTTCTGTTGTTCACAAATTGCAGGCTATTCTCGGTAGGTTGAAGGCTAATGATAGACTTGATAAATGTGTTTCGATTTACGTTGAAGTTAGAAGTTCTAATGTGAGGGCGAGTTTGAAGGCGCTGAATTTGGATTATCTTGAGATCTCTGTGTCTGAGTTCAATGATGTTCAGAGTATAGAGGGGTATATAGCTCAGTGGGGGAAGCATTTGGAGTTTGCGGTGAAGCATTTGTTCGAGGCTGAGTATAAGCTTTGTAATGATGTGTTTGAAAGGATTGGACTCGATGTGTGGATGGGTTGCTTTTCGAAGATAGCTGCACAGGCTGGTATACTTGCATTTCTTCAATTTGGGAAGACTGTTACGGAGAGTAAGAAAGATCCGATTAAGCTTTTGAAGTTGTTGGATATTTTTGCGTCGTTGAACAAATTGAGACTGGATTTCAACCGTCTTTTCGGGGGAACTGCGTGTGCCGAAATCCAAAGTTTGACAAGGGAACTTATCAAGAGTGTGATTGATGGAGCAGCAGAAATTTTCTGGGAACTTCTGGTTCAGGTAGAGTTACAGAGGCAGAACCCTCCTCCTCCGGACGGGAATGTCCCGCGATTGGTTAGCTTTATCACTGATTACTGCAATAAACTCCTCGGAGACGACTATAAGCCTATACTGACCCAAGTCCTGATCATTCACCGTAGTTGGAAGCGGCAAAGTTTTCAGGAGAAGCTCCTTGTTAATGAGATTTTGAACATACTGAAAGCCGTTGAATTAAATTTGGAGACATGGATCAAGGCTTACGATGATCCTATGTTGTCCAACTTTTTTGCTATGAACAATCACTGGCATCTGTTCAAGCATTTGAAAGGAACGAAACTCGGGGATCTCTTGGGGGATTCTTGGTTAAGGGAACAAGAACAGTACAAAGACTATTACTTGACAATATTCTTGCGAGATAGCTGGGGAAAGCTTCCTGGACATTTGAGTAGGGAAGGGCTGATTCTTTTCTCGGGAGGGCGTGCAACAGCTCGTGATCTGGTCAAGAAAAGACTGAAAAAGTTCAATGAAGTTTTCGATGAGATGTTTTCGAAGCAGTCAGGTTGGATCATGGTAGAGCGAGATCTTAGAGAGAAGACGTGTCAGCTTATAGTGCAGACTGTGGTGCCTGTTTACCGGAGTTACATGCAGAATTACGGTCCCTTGGTTGAGCAAGATGCCAGCTCCAACAAATATGCAAAATACACAGTGCAGAAGCTGGAAGAAATGCTTTTGTGCCTTTACCGGCCGAAGCCTGCAAGACATGGTAGCTTGAGAAGTCCGCAACTTAGTGGAAATTTTGTATCTCCTTCAAAAAGGGGTTTCTGTAAAAGAAGTGCAATTTCTAAGTGTACCATAGGCTATGACGATCCTTTGGTGAATAAATGTGGACCTTCCAATGAGGTTCTTGGGTCATACTCCTTACTAAGTGGAACATACTCCAATGTATGCTCTCACGCCTGCGTCAAGTTGTTGCTTCGTTGA 2175 0.4354 MAGSGSGSVSCKSDSRIENLICATKSLKLSLEKSKSVGLALDKAGPRLDEIRVRLPWLESAVRPIRAEKDALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRIDLPGYLSVLKRLEEALRFLGDNCGLAIQWLDDIVEYLEDNSVADQVYLKNLKKELENLKVSQNGDLDGGLLQAALDKLENEFRLLLTENSVPLPMSNSLGDQPCIAPSPLPVSVVHKLQAILGRLKANDRLDKCVSIYVEVRSSNVRASLKALNLDYLEISVSEFNDVQSIEGYIAQWGKHLEFAVKHLFEAEYKLCNDVFERIGLDVWMGCFSKIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLNKLRLDFNRLFGGTACAEIQSLTRELIKSVIDGAAEIFWELLVQVELQRQNPPPPDGNVPRLVSFITDYCNKLLGDDYKPILTQVLIIHRSWKRQSFQEKLLVNEILNILKAVELNLETWIKAYDDPMLSNFFAMNNHWHLFKHLKGTKLGDLLGDSWLREQEQYKDYYLTIFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMFSKQSGWIMVERDLREKTCQLIVQTVVPVYRSYMQNYGPLVEQDASSNKYAKYTVQKLEEMLLCLYRPKPARHGSLRSPQLSGNFVSPSKRGFCKRSAISKCTIGYDDPLVNKCGPSNEVLGSYSLLSGTYSNVCSHACVKLLLR 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03096 724 PANTHER EXOCYST COMPLEX PROTEIN EXO70 16 659 IPR004140 GO:0000145|GO:0006887
Car04g03096 724 SUPERFAMILY Cullin repeat-like 89 645 IPR016159 -
Car04g03096 724 Pfam Exo70 exocyst complex subunit 286 641 IPR046364 GO:0000145|GO:0005546|GO:0006887
Car04g03096 724 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 16 659 - -
Car04g03096 724 Gene3D Exocyst complex component Exo70 139 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03096 Car-Chr4 59094117 59096747 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03096 10 664 EXO70 exocyst subunit family AT4G31540 73.094 0.0 1009
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03096 K07195 - gmx:100796139 1134.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03096 04 59094117 59096747 Car04g03096 04 59094117 59096747 ECH