Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03095 ATGGCAGTGGAACTCATGGGGTTCCCAAAATTAGATGAACAAAAGGCTATACAAGAGGCTGCATCAGAAGGTCTCAAAGGCATGGAACACCTGATCCTAACCCTTTCTCATCAACCAACTCAATTGAACACTCAACTCACCGACCTCACCGTTTCAAAATTCAAAAAATTCATTTCCTTGCTAAACCGAACCGGTCACGCTCGGTTCAGACGAGCCCCGGTTCACTTCTCAACATCACCGGTTCGACCTCAAACTCCACCGGTTCAATCAACACCTTCAACCTCTTCACTTCCCCCGCCTCAAGTTCAATCATCGGCCATCTCGTTACCGCCGCACTTTCCTTCTCCGTCGTCGGCTCCGGTTACAAATCGCCACGCGCCGGCGAACTTCGTCCAACCGCAATCACATAGCCTCACGCTTGATTTCACGAAGCCAAACGACGTCGTTTTGAACAAACCCATGGTTGAACTTGAATTCTCGAAGGAAACAGCAACGTTTAGCGTTTCTTCGAATTCGTCGTTCATGTCCTCCGCCATCACCGGCGACGGCAGCGTTTCCAACGGGAAACAAGGTTCCTCGATTTTCTTAACTCCGGTGGCAGTAGCCTCGACAGCACCGACAATCTCCGGCGGAAAACCGCCACTGTCGTCGGCTCCGTCTAAGAAAAGGTGCCACGATCACGGTGATCACTCCGACGACGTTTCAGGCACAAATAAGTGCCACTGTGTCAAGAGAAGGAAAAATAGGGTAAAGAGGACAGTAAGAGTGCCGGCGATAAGTTCAAAGACCGCCGATATACCACCGGACGAGTACTCGTGGCGAAAATACGGTCAAAAACCGATCAAAGGTTCACCGTACCCGCGGTGA 867 0.5087 MAVELMGFPKLDEQKAIQEAASEGLKGMEHLILTLSHQPTQLNTQLTDLTVSKFKKFISLLNRTGHARFRRAPVHFSTSPVRPQTPPVQSTPSTSSLPPPQVQSSAISLPPHFPSPSSAPVTNRHAPANFVQPQSHSLTLDFTKPNDVVLNKPMVELEFSKETATFSVSSNSSFMSSAITGDGSVSNGKQGSSIFLTPVAVASTAPTISGGKPPLSSAPSKKRCHDHGDHSDDVSGTNKCHCVKRRKNRVKRTVRVPAISSKTADIPPDEYSWRKYGQKPIKGSPYPR 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03095 288 Pfam WRKY DNA -binding domain 269 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car04g03095 288 SUPERFAMILY WRKY DNA-binding domain 263 288 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car04g03095 288 MobiDBLite consensus disorder prediction 78 125 - -
Car04g03095 288 MobiDBLite consensus disorder prediction 258 288 - -
Car04g03095 288 MobiDBLite consensus disorder prediction 205 238 - -
Car04g03095 288 Gene3D WRKY domain 246 288 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car04g03095 288 ProSiteProfiles WRKY domain profile. 262 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car04g03095 288 PANTHER WRKY PROTEIN 12 288 - -
Car04g03095 288 MobiDBLite consensus disorder prediction 219 238 - -
Car04g03095 288 MobiDBLite consensus disorder prediction 71 125 - -
Car04g03095 288 Pfam Plant zinc cluster domain 221 265 IPR018872 -
Car04g03095 288 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 12 288 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03095 Car-Chr4 59078876 59081962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03095 1 288 WRKY Transcription Factor Family AT4G31550 55.705 5.49e-93 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car04g03095 Plant_zn_clust 3.6e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03095 - - cam:101509842 494.197