Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03089 ATGGCTCATAAAAGAGCATACTATAGCCTTTTCATGCTCTCTATGCTAACCATTTATTTTGTCCCAATTTTTGGTGACACAAATGGTCAAATTTTGATTAGGTTCAGAAGCTTTTTGTCCAATAACAATGCTTTAAACAATTGGATTGATGAGTCTAATTTGTGCAATTGGGTTGGTTTATTATGCACAAACAACAACTTTTATGGTTTGAGACTAGAAAACATGGGACTAGGTGGTAAAATTGATGTAGACACATTATTGAAGTTATCAAATTTTGTTAGTTTTAGTGTCATGAACAATTCATTTGAGGGTCCAATGCCTGAATTCAAAAGGGTTGTGAAGTTAAGGGGATTATTTTTGTCCAATAATAAATTTTCAGGTGAAATTTTAGATGATGCTTTTGAGGGTATGGGAAATCTTAAAAGGGTGATTTTGGCAGGAAATGGTTTCAATGGTCATATACCTATTTCCCTTGCTAAATTGCCTAAGCTTTTGGATTTGGATTTGCATGGAAATAGTTTTGGAGGTAATATACCTGAATTTCAACAAAAGAGTTTTAGAAAATTTGACTTGTCTAATAATCAATTGGAGGGTCCAATACCACAAAGCTTAAGCAATGAGCCCTCATCCTCTTTTTCTGCCAACAAAGGCCTATGTGGAAAACCTTTGAGCAATCCATGCAACAATTCCCCAACCAAATCAATTGTGCATCCCAACCAAGCTCCTTCATCTCAAGGAAAACAAAAGAAACACACAAAAATCCTTATAGTTGTCATCATAGTAATAGCTATGATTGTATTGGCATCAATAGCATCACTCTTATTTATCCAAAGTCGCCGCGGCCGGCGGCGGCAAAACTTACACCTCCAACCCATATTAGGCCTACAACTAAACTCTCAAAAGACACCAAGTCTCAAAGAGACACAATCCAATGTTGATCTAACTGGTGAATTTAGTAAAGGTGATGAGCATGGTGAATTGAACTTTGTTAGGGAAGACAAAGGTAGTTTTGATTTGCAAAGCCTTCTTAGGGCCTCAGCTGAGGTGCTTGGAAGTGGAAGTTTTGGATCAACTTATAAAGCTATGGTTTTGAATGGACCAACTTTGGTTGTAAAGAGATTTAGGCACATGAACAATGTTGGGAGAGTGGAGTTTTTTGAACACATGAAAAAGCTTGGAAGTTTGACACATCCTAATTTGTTGCCTCTTGTTGCTTTCTACTATAGAAAAGATGAGAAGTTTTTGGTTTATGATTTTGGTGAAAATGGTAGCTTGGCTAGTCATCTACATGGTAGAAATGGAAATATACTAACATGGTCAAATCGTTTAAAAATCATAAAAGGAGTAGCAAGAGGCTTATCACATCTCTACAAAAAGTTCCCTTCACAAAACCTACCACATGGTCATCTAAAATCCTCCAATGTAATGCTAAACAATTCATTTGATCCACTTTTAACAGAGTATGGACTTGTTCCTATCACAAACAAAAATCATGCTCAACAATTCATGGCATCCTACAAATCACCAGAAGTCACACACTTTGATAGACCAAATGAGAAAACAGATATTTGGTGTCTTGGAATCTTAATACTAGAACTATTAACAGGAAAGTTTCCATCAAATTATCTAAGACATGGAAAAGGTGATCAAGGTTCTGATTTGGCAACATGGGTTAATTCAGTTGTGAGAGAAGAGTGGACAGGTGAAGTGTTTGATAAAGATATGATGAAGACAAGAAATGTTGGTGAAGGTGAGATGTTGAAGCTTTTGAGAATTGGAATGTTTTGTTGTGAATGGAGTGTTGAGAGAAGATGGGATTGGAAAATGGCTTTGGCTAAGATTGAAGAACTTAAGGAGAAAGATAATATTAATAGTGAAGATGAATCTTTTTCTTATGTTAGTGATGGTGATTTGTATTCAAGAGGTGTCACTGATGATGACTTCTCTTTTTCTGTTAATGATCATTCACATGTTGATAACTTTGGGAATGTAGTATAG 1998 0.3579 MAHKRAYYSLFMLSMLTIYFVPIFGDTNGQILIRFRSFLSNNNALNNWIDESNLCNWVGLLCTNNNFYGLRLENMGLGGKIDVDTLLKLSNFVSFSVMNNSFEGPMPEFKRVVKLRGLFLSNNKFSGEILDDAFEGMGNLKRVILAGNGFNGHIPISLAKLPKLLDLDLHGNSFGGNIPEFQQKSFRKFDLSNNQLEGPIPQSLSNEPSSSFSANKGLCGKPLSNPCNNSPTKSIVHPNQAPSSQGKQKKHTKILIVVIIVIAMIVLASIASLLFIQSRRGRRRQNLHLQPILGLQLNSQKTPSLKETQSNVDLTGEFSKGDEHGELNFVREDKGSFDLQSLLRASAEVLGSGSFGSTYKAMVLNGPTLVVKRFRHMNNVGRVEFFEHMKKLGSLTHPNLLPLVAFYYRKDEKFLVYDFGENGSLASHLHGRNGNILTWSNRLKIIKGVARGLSHLYKKFPSQNLPHGHLKSSNVMLNNSFDPLLTEYGLVPITNKNHAQQFMASYKSPEVTHFDRPNEKTDIWCLGILILELLTGKFPSNYLRHGKGDQGSDLATWVNSVVREEWTGEVFDKDMMKTRNVGEGEMLKLLRIGMFCCEWSVERRWDWKMALAKIEELKEKDNINSEDESFSYVSDGDLYSRGVTDDDFSFSVNDHSHVDNFGNVV 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03089 665 Gene3D Transferase(Phosphotransferase) domain 1 421 638 - -
Car04g03089 665 Gene3D Phosphorylase Kinase; domain 1 314 419 - -
Car04g03089 665 Gene3D Ribonuclease Inhibitor 28 135 IPR032675 -
Car04g03089 665 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 625 - -
Car04g03089 665 Gene3D Ribonuclease Inhibitor 136 229 IPR032675 -
Car04g03089 665 SUPERFAMILY L domain-like 52 206 - -
Car04g03089 665 PANTHER LRR RECEPTOR-LIKE KINASE 10 625 - -
Car04g03089 665 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Car04g03089 665 ProSiteProfiles Protein kinase domain profile. 344 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g03089 665 Pfam Leucine rich repeat N-terminal domain 29 62 IPR013210 -
Car04g03089 665 Pfam Protein kinase domain 347 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g03089 665 SUPERFAMILY Protein kinase-like (PK-like) 348 617 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03089 Car-Chr4 58997027 59000793 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03089 12 651 Receptor kinase-like Gene Family AT5G35390 45.249 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car04g03089 Pkinase 3.9e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03089 - - gmx:100786980 889.412