Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03086 ATGGTAGTAATCGGGCAGCAGGAGATTGAGGATCGAAACGCGAATCCCTCCAACGCCGGTACAAACAACGATGCTTCCGACGGCTTTGAAACCGCCAGTGATACCGATGTTGGCAGCGACGGCGACGGTAATGACGACGGAACAATTAAACAGGAAAAACAGGATCATCCTCAGCAACAGCACCACCGGATAAAGCAAGAGCAGGAGAAGAGTGATCCTGGAAGAATCATTTCTTCCGACGAGGCTTCGATCAACGATGAGGAATTGAAACAGGTAGCATTGATTCAAGCAAATGAAGCAAAGGTAGAAGGGAACAAACTTTTTGTCGATGCAAAGTATGAAGAGGCACTATCACAATATGAACTGGCTTTACAAGTTGCGCCAGACATGCCTTCTTCTGTGGAAATACGCTCAATATGCCATGCAAACCGTGGTGTGTGCTTTCTGAAAATGGGAAAATATGAAAACACAGTTAAAGAGTGCACAAAAGCATTAGAATTGAATCCAACATATGTCAAAGCTTTGGTAAGAAGAGGAGAGGCCCATGAAAAGCTTGAGCATTTTGAAGAAGCCATTGCTGATATGAAAAAGATCTTAGAAATTGATCCCTCAAATGATCAAGCTGGGAAATCCATTCGCCGATTAGAGCCCCTTGCTGCAGTAAAAAGGGAAAAGATGAAAGAAGAAATGATTGCAAAACTGAAAGATATGGGCAACTCTCTCTTGGGCCGCTTTGGGATGAGCGTGGACAACTTTAAAGCAGTCCAAGATCCAGCCACTGGTTCCTATTCTGTCAAATTCCAACAATAA 810 0.4383 MVVIGQQEIEDRNANPSNAGTNNDASDGFETASDTDVGSDGDGNDDGTIKQEKQDHPQQQHHRIKQEQEKSDPGRIISSDEASINDEELKQVALIQANEAKVEGNKLFVDAKYEEALSQYELALQVAPDMPSSVEIRSICHANRGVCFLKMGKYENTVKECTKALELNPTYVKALVRRGEAHEKLEHFEEAIADMKKILEIDPSNDQAGKSIRRLEPLAAVKREKMKEEMIAKLKDMGNSLLGRFGMSVDNFKAVQDPATGSYSVKFQQ 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03086 269 MobiDBLite consensus disorder prediction 43 83 - -
Car04g03086 269 MobiDBLite consensus disorder prediction 1 83 - -
Car04g03086 269 Gene3D Tetratricopeptide repeat domain 50 236 IPR011990 GO:0005515
Car04g03086 269 Pfam Tetratricopeptide repeat 173 205 IPR013105 -
Car04g03086 269 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 22 269 - -
Car04g03086 269 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 22 269 - -
Car04g03086 269 SUPERFAMILY TPR-like 97 210 IPR011990 GO:0005515
Car04g03086 269 MobiDBLite consensus disorder prediction 10 33 - -
Car04g03086 269 Pfam Tetratricopeptide repeat 140 171 IPR001440 GO:0005515
Car04g03086 269 ProSiteProfiles TPR repeat profile. 138 171 IPR019734 GO:0005515
Car04g03086 269 SMART tpr_5 172 205 IPR019734 GO:0005515
Car04g03086 269 SMART tpr_5 97 130 IPR019734 GO:0005515
Car04g03086 269 SMART tpr_5 138 171 IPR019734 GO:0005515
Car04g03086 269 ProSiteProfiles TPR repeat profile. 172 205 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03086 Car-Chr4 58977947 58981280 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03086 97 239 Calmodulin-binding Proteins AT3G25230 37.748 8.04e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03086 K24926 - gmx:100808386 364.385