Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03078 ATGGAACCAAAGTGGAGCACCATTCTCGCGCCTTCTTCAATTTTCTCCGGCTTCGACGATCTCAAGTGGATCACAACGGAATTCGATCACGAACTTTTCACGAAGCGTCCAATTGCCGGAGGAATCGAAACAGCAAACGAATCAGCGAACGACAACGACGTGAAACCGTTTAAGGTGGATCCGTTCACCGTCGTTGGCGATGTTTGCTCCGGTAACCTCGCTGACGCCGCCGATTTTCAAAATCTGGATGCAGTAACTTCATTTTCGACTTGTGGTGAAGCTACAAATAGTACTTTTGTATCCTCTCAAAACCTCACTTCCAAGCATTCCACCATCACTCCAACTATTGATTCACAATCATCCATTTCTGCTACCGTAACAAGCCCAGTGTCAGCTAATAAACCAACAAATCAAGCGAAAGGGGTTATTACTACAAGTGGTTCCTCACGTGATCCTTCTGATGAAGATGATGAAGCTGGTCCTTGTGAACAAAGCACCAATCCCATTGATATGAAGCGCCTTAGAAGAAAAGTTTCTAATCGCGAATCTGCCCGAAGGTCTAGAAGAAGAAAACAAGCCCATTTGACAGACCTGGAGGTTCAGGTTGAACAGCTGAGGTTGGAAAATGCAAGCCTATTTAAGCAGCTTACAGATGCTAGCCAACAATTTCGTGAAGCTAACACTAATAACCGAGTGTTAAAATCAGATGTTGAAGCTTTGAGAGCTAAGGTGAAGTTAGCAGAGGATATGGTATCTAGGGGCACTTTACCGACATTTAACAACCAACTTCTCCAAAATCAGAATCAATTGAACACCACATCACCACAAATCAACACTAGTAATCTCCGCTGCATGCAACATGTTTCGCCGACCATAACCATCCATGGAAATATTGCTTCATATGGTGTTAGTGGACATAACTCAGCTATTGGACTTGGAGATTTTGATATAACTTGCAATGATTTCAACAATGGAGTCAATAGCGATGCTGTTAGCTCTTTGACTAGTATATGGCCTTAA 1020 0.4314 MEPKWSTILAPSSIFSGFDDLKWITTEFDHELFTKRPIAGGIETANESANDNDVKPFKVDPFTVVGDVCSGNLADAADFQNLDAVTSFSTCGEATNSTFVSSQNLTSKHSTITPTIDSQSSISATVTSPVSANKPTNQAKGVITTSGSSRDPSDEDDEAGPCEQSTNPIDMKRLRRKVSNRESARRSRRRKQAHLTDLEVQVEQLRLENASLFKQLTDASQQFREANTNNRVLKSDVEALRAKVKLAEDMVSRGTLPTFNNQLLQNQNQLNTTSPQINTSNLRCMQHVSPTITIHGNIASYGVSGHNSAIGLGDFDITCNDFNNGVNSDAVSSLTSIWP 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03078 339 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 170 233 IPR004827 GO:0003700|GO:0006355
Car04g03078 339 MobiDBLite consensus disorder prediction 102 149 - -
Car04g03078 339 SMART brlzneu 168 232 IPR004827 GO:0003700|GO:0006355
Car04g03078 339 SUPERFAMILY Leucine zipper domain 172 222 IPR046347 GO:0003700|GO:0006355
Car04g03078 339 Coils Coil 188 250 - -
Car04g03078 339 PANTHER BASIC LEUCINE ZIPPER 63 53 339 - -
Car04g03078 339 CDD bZIP_plant_GBF1 173 224 IPR045314 GO:0003700|GO:0006355
Car04g03078 339 Pfam bZIP transcription factor 171 221 IPR004827 GO:0003700|GO:0006355
Car04g03078 339 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 175 190 IPR004827 GO:0003700|GO:0006355
Car04g03078 339 MobiDBLite consensus disorder prediction 102 170 - -
Car04g03078 339 PANTHER BASIC LEUCINE ZIPPER 9 53 339 - -
Car04g03078 339 Gene3D - 171 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03078 Car-Chr4 58836500 58844513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03078 114 339 bZIP Transcription Factor Family AT5G24800 50.000 1.21e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car04g03078 bZIP_1 1.6e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03078 K25784 - gmx:778193 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03064 05 75439319 75445161 Car04g03078 04 58836500 58844513 PCT