Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03074 ATGCAAAAGAACAAAGAGGTTATTAACAAAGAAGGGAAGGGGATGGAAATTGAAGGAATTCCTCTTGCAAAAGAGGAAACCCTACCTCCCGGTTTTCGATTTCATCCGACCGATGAAGAACTCATCACTTACTATCTTGTAAACAAGATTTCAGATTCTGATTTTAGTTGCAAAGCAATTGGTGAAGTAGATCTCAACAAATCTGAGCCATGGGAGCTTCCAGGGAAGGCAAAGATGGGTCAAAAAGAATGGTATTTCTTCAGTCTAAGAGATCGCAAATACCCAACAGGTGTGAGAACTAATAGAGCAACAAACACTGGATATTGGAAAACCACAGGCAAAGACAAAGAGATATTTGACAATGTTACATCTGAATTGGTTGGTATGAAGAAGACTTTGGTTTTTTACAAAGGAAGAGCTCCTAGAGGAGAGAAAACCAATTGGGTCATGCATGAATATCGTATTCATTCAAAATCCACCTATAGGACCAACAAGCAAGATGAATGGGTGGTTAGTAGGGTATTCCGCAAGAGTGTTGGAGCAAAGAAGTATCCTTCTTCAAACCCTACAAGAGCAACATTAAACCCTTACAATATTAACCTAGAAGTTGGCCCTAGCATTAACATGCAACCACAACCAATGATGCATCTAGGAGATCATTCAACTACTCATTTTCTCTATGGAAGAAACTACATCAACACTCCTGACCTAGTTGAAGTCAATAGGGTTCTAAGATCAAGTGGTGTTGTACCATTACCAATGCAATATTCCAATTTATCATCATCACCCTTAGGATTCACCATTTCAGGGCTTAATTTGAATCTTGGAGGAGCATCAACACAACCATCAACTCAAGTGCATGATTTTAGCTCCAACATGATGACTACTACTACTACAACCCTTGGTGGAGAGaatcataataataataataatTTAGGGTATGGTGGAGAAGTGAATATTAATGCAAATCCTAATGGAAATAATAGGTACATGGGTATGGAACATTGTGTGGATCTTGATAATTACTGGCCATCTTACTGA 1041 0.3833 MQKNKEVINKEGKGMEIEGIPLAKEETLPPGFRFHPTDEELITYYLVNKISDSDFSCKAIGEVDLNKSEPWELPGKAKMGQKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFDNVTSELVGMKKTLVFYKGRAPRGEKTNWVMHEYRIHSKSTYRTNKQDEWVVSRVFRKSVGAKKYPSSNPTRATLNPYNINLEVGPSINMQPQPMMHLGDHSTTHFLYGRNYINTPDLVEVNRVLRSSGVVPLPMQYSNLSSSPLGFTISGLNLNLGGASTQPSTQVHDFSSNMMTTTTTTLGGENHNNNNNLGYGGEVNINANPNGNNRYMGMEHCVDLDNYWPSY 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03074 346 Gene3D NAC domain 37 180 IPR036093 GO:0003677|GO:0006355
Car04g03074 346 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 23 343 - -
Car04g03074 346 Pfam No apical meristem (NAM) protein 29 155 IPR003441 GO:0003677|GO:0006355
Car04g03074 346 SUPERFAMILY NAC domain 24 177 IPR036093 GO:0003677|GO:0006355
Car04g03074 346 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 23 343 - -
Car04g03074 346 ProSiteProfiles NAC domain profile. 28 177 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03074 Car-Chr4 58792396 58795329 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03074 24 346 NAC Transcription Factor Family AT2G24430 53.488 5.91e-113 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car04g03074 NAM 5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03074 - - gmx:100811175 454.136