Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03060 ATGTTTGCAGAAACTGGTCTTCTCTTCCCATATTTGCAGAATTACTCTCATGAGTTTCAACAACTTGAAGAGTATTGCATGACTCACAAGTCCAATGCTTCAATGAGTGACCTTGTTCAATCATCTGCAATGTCAGAATTCGATTTATTTGTAGAGGGAGATCTGTTCAAAGCGCCCGAGACTATTATCGAAGAACCAGCGATGGACCTTGATCCAATGCAAGCAGCGATGTCAATGATATCTTGTGGGGAAGACGTCTCGTCGCAGGGTTTAAAATCTTCAGATATTGATGTACTTCAAAATGAACAGCTTTTGAGTGAGGTATACTATGAGTGCAAGAAAGATATGTTGGAAAAGGCGGCTATAGAGTCACCTCTGTCTGAGATTCTGGAAATCAAGATTCCTGCTCTGAACATAGAAGAAAATCCGATTCAAGAAAACAAACCGCTTCCTGATTTACTATTACCAAAGAGTGTCAGTTCAGGAAGTTTGAGTTCAATGGATTGGATGCATGGAGCTGCAATGAAACCTGCTTTCCTTGATTTCCCTGGAATAGATTTCAATGCGGTTTATGGCATGCGGAGAGCATTTAGTGAAGGCGATATAAAGACTCTTGGAAATGGCAACATGAATGTTTGCCAATCTACTCTTGAGAGGCCTTTTCTTCTGAGCAGCAACTGCACTAGCGAGCAACGGCAAGAAAAACTCTCCAGATACAGGAATAAGAAGACAAGGAGAAACTTTGGAAGGAAAATCAAGTATGCTTGCAGGAAGGCGCTCGCCGACAGTCAACCAAGAATCCGCGGAAGATTCGCAAAAACGGAGGAATTCGATGTCAAGAGACAATGA 849 0.4205 MFAETGLLFPYLQNYSHEFQQLEEYCMTHKSNASMSDLVQSSAMSEFDLFVEGDLFKAPETIIEEPAMDLDPMQAAMSMISCGEDVSSQGLKSSDIDVLQNEQLLSEVYYECKKDMLEKAAIESPLSEILEIKIPALNIEENPIQENKPLPDLLLPKSVSSGSLSSMDWMHGAAMKPAFLDFPGIDFNAVYGMRRAFSEGDIKTLGNGNMNVCQSTLERPFLLSSNCTSEQRQEKLSRYRNKKTRRNFGRKIKYACRKALADSQPRIRGRFAKTEEFDVKRQ 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03060 282 PANTHER CCT MOTIF FAMILY PROTEIN 26 280 - -
Car04g03060 282 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 26 280 - -
Car04g03060 282 Pfam CCT motif 232 274 IPR010402 GO:0005515
Car04g03060 282 ProSiteProfiles CCT domain profile. 232 274 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03060 Car-Chr4 58604924 58609470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03060 206 276 C2C2-CO-like Transcription Factor Family AT5G57660 43.056 3.49e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car04g03060 CCT 1.8e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03060 - - gmx:100814332 451.055