Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03054 ATGGATGAAACTGGTGATGAAGATTTCAATAGGTGCTCAAGAAATGGGTCAGGTGGATGGAGGTGCAAGGAGAAAGCTTTAGCTGGAAAAACCCTATGTGAGAAACACCATCTCTATAACCTTGAGAGAACAAAAGAGAAAGGAAAAAAAAGAAAACTTGAAGAAAATAGTTCACAAACTGGTGGAGGTGAAGTTAAATGGTTGTTTAGTGATGATCATAATGGTGGTGGTGGGACCCATGTTGTTGAGGAATTTGCAGGTCTTTTTGGTGGAAATGAAGTGAAtggtggtggtgttaattttggttttggtggtgAAAGTTTTAATCTTTTTGGTCAACAACAAATTGGTGGTTTTGGTCAAGGATGTGGAAATCTAGAATTTCAACTTGGTGATGGTGTTGGGAATAGTGTTGCTGGTTTAGGTCAACCATGGAATAGTGTAGGTGTATTTGGTAATGCTGGTGGTGTTGTTTCTGGAAATAGGGTAGGTGGTGTTTGTGAAAATGCTTTTCTTGGTATTTCTTCTGAAGGTTTGGTTGCTGGTGAAGCTGGTTTTGGAAGTTTATATGATAGAAGTTTTCAAGCACTTCTTTGTCAAGGTAGGGTTTGTGATGAAGATGTGAGTTTAATTGGTGGTAGTAATAGTACTGGCTTTCAAGGGTTGGTTGGTGAAAGTGGTTATGGTTTTAGAAGTGTAGGAAATCTAAGTCAATGTGGTAAATTTGTAGGTGAAAATGTTGGGAGCATTGTGGTTCCTGAGTCAAGTAACAAGGTGATTGCAGCAGTTGGTGTGGACGAGGGAATGGAAAAGTTGTTAAGTGGAGGAGTTTGTATCGATGAAAAGGCGAAAGATGAAGGGTTGAAGCCTTTGATTAAGATGGGTAGGCCTAAGGGTTCTAAGAATAAGAGTAAGAAAAAAGATGTTAACTTTGGTTTGGATGGAGGAAGTGTTTGTGGAAGTGATAATAATAATGTAGGAACAATTGGGATGAGTGGTGTCACAATTTTAGAGAGTGGAAAACCAATTTTTTGTGGTAAGGCTGATCATGAAGGTGTGGACTTGGGTGAGATTGGAAGGACGGAGAAGCGTGGTCACGTGGGTGATTGGAAGCATGGAAGGGAGATTGTTCTGGGGGTTGGTTATGAAGTTGCTGGTGATGATGATATTTCAACACCTAGGAAGCGCCGTGGAAGGAAGGGCTTGATAGACAAACAGGAGAATGTAGATGAGGTTTGTAATGAAGTTGATGGTGTTAGTGAGGTTGCAAGGCCAAAGAAGCGTGGTCGGCCAAAGGGTTCGGTAAACAGAAAGAAGAATGTAAAGGAGGTTACCGATGAAGTTGGTGATTCTAGTGAGATGGCAAGGCCGAAGAATATAGAGGAGGTTAGTAATGAAGTTGGTGGTGCTAGTCAGGTTGCAAGGCCGAAGAGTATAGAGGAGGTTAGCAATGAAGTTGGTGGTGCTAGTGAGATTGCAAGGCCGAAAAGGCGTGGTCGGCCGAAAGGTTCAAAATGTGGAACAGAGAATGTTATGGAGGTCAGTAATGAAGTCGTTGGTGATGGCAAGATTGCAAGGCCAAAGAAGCGTGGACGGCCAAAAGGTTCAAAATGTGGAAAGGAGATTGTCCTTAAGGGTAGTGATAAAGTTGCTAGTGCTGGTGAGATTGAAAGACCAAAGAAGCGTGGTCGACCAAAGGGTTCAAAAAAGGCAAAATGGGTAACCTATGTATGTGCTTCTAAAATCGAAGGAGCTGATGAGATTGCAACACAAGGTTCAGAAAACAAAAAGCTGAGCATTCTGTGTCAAAAAGGCGCGGACAAGTTTGCAAGCCTAACTAATAAACTTGGTCCAGCATTGTGTACAAGGAATAAATTGAGAGGTACTGTATCTGAGGATCAGGAGTGTCAAGGAATGTCTGTTGATATTCATCTCGAAGTTGACAATGGAACCATGCGTGCCTTGCCGAGTGGTTTGGAGATTACTACATTGGTTCCTTTATTATGTGAGCAGGAAAAAGGGATACATTCTGAAGCCGCCGATCATATTGAAAACATAACTACTCAGCCGATAGTTAAGCGTGGTCGACCTAAGGGCTCAATGAGCAAGAAGAAAAAACTAGAAGATCAAGAATTGCCTGTCCAAACCCTTATTCAAGATGCGGTTCAAAATGATTGTAATGTTAAACTAAAGCGAGGTCGGCCCAAGGGAGTTAAAAATAAGAAAAGTATTGCTGGTGAAGCTGGAAGCAAGTTATTAGTTAAGGCCAAAAAAAGGCGTGGTAGGCCAAAGGGTTCTGGGAAAAAGCAAAAGAAGATTGCTCTGCCTCTTCCATTGCATTCTCGGATTGAAAGGCGTGGTAGGCCAAAGGGTTCTGGCAAAAAGCAAAAGGAGATTGCTTTTCAATTGGATTCACAGATTGAAAGTCAGAAGAGTACTTGTTTTGACGTAGTTTTGAGTACGATTATGCCGCAGCAGAAGCATGTACACGAGGAGTCCGATTCAACACTGGAAGATCAAGTGAATAAGAAAGAAAAGTCAGATGTTGTACTTGGGTGCTCGAAGGAGTCTGGAATTGAAAAGATAACAAAAGGATTGATGAGTGAATCCAGCAATGTCCATAAGAGGTGCAGTGAAAGACTAAGAAAATTACTAATCGACGATAAGAGTTCTCCATATGTTGAAGTGGAAGAAACTACAGACCATGAGCACGAGAGTTCTCAGGATGTTGAAGTGGAAGCAACTATAGACCATGATCACCAGAGTTCTCAGGATGTTGAAGTGGACGAAACTATAGACCATGACCACAATAGTTCTCAGGATGTTGAAGTGGACAAAACTATAGACCATGACCACAAGAGTTCTCAGGATGTTGAAGTGGAAGAGACTATAGACCATGACCCCAAGAATTCTCAGGATGTTGAAGTGGAAGAAACTATAGACCATGGATTGGAATCTCCACATTTGATGGGAGAATCCAATACCAAACGGGCGCCAAGGAATTCAAGGTGTCATCAGTGTTGGAATAAAAGTAGGACTGGTCTTGTTGCTTGTACCAAGTGCAAAAGAAAGAAATATTGTTACGAGTGCTTAGCAAAGTGGTACCCTCATAAAACTAAAGAGGAGGTCGAGACTGCTTGTCCCTTTTGTCTCGATAATTGCAATTGTCGACTGTGCTTGAAGAAAACTATATCTATTCTGAGTGGGAATGGTGAAGCAGATAAAGATGTCAAGTTACAGAAATTGTTTTTCTTGCTTAACAAAACTTTGCCTTTACTCCAACATATCCAACGTGAGCAGAGATTGGAATTGGAAGTAGAAGCAAGCATACACGGTTCCCTGTCGGTGGAAGAGGAGGATATTATGCAGGCAGTAGTGGACAACGATGATCGAGTTTATTGTGACAACTGCAATACATCCATTGTCAATTTCCACAGAAGTTGTCCCAATCTTAATTGTCGGTACGATCTCTGTCTCACTTGTTGCATGGAAATAAGAAACGGAGTAGTTCATTGTGAAGATATTCCTGCTAGCGGTAATGAGGTAACGCTTGATACACCGGAACTAAGAAACGGAGTAGTTCATTGTGAAGATATTCCTGCAAGCAGTAATGAGGTAATGCTTGATACACCGCCTGTAACTATTGCTTGGAGAGCTGAGGCAAATGGTGGCATACCTTGCCCTCCAAAAGCTAGAGGAGGTTGCGGTACTGCTATCCTCTCACTGAGGCGCCTTTTTGAAGCCAATTGGATTGACAAATTGACTAAGAATGTGGAGGAACTTACCGTCAAATATCAGCCACCTGTTGTTGATCTTTCTCTAGGATGTTTAGAGTGCTGTAATTTTAAGGAAGATGCGGCACAAAATTCTGCAAGGAAGGCAGCTTCAAGAGTAAATGATCGTGACAACTTTTTGTACTGTCCGGATGCCGTTGAAATGGGAGACGAGGAATTCAAGCATTTCCAAAGACATTGGATAAGAGGTGAACCTGTTATAGTTAAGAATGTGTATAAAAAGGCTAGTGGCCTTAGCTGGGACCCAATGGTGATGTGGAGAGCTTTTATTGGGGCAAGGAAAGTATTAAAAGAGGAGGCTGCTAGTTTTAAAGCCATTGACTGCTTGGATTGGTGCGAGGTACAAATCAATGTGTTTCGGTTCTTCAAAGGCTATTTGGAAGGGCGTAGGTACAGAAACGGATGGCCAGAGATGCTGAAGCTAAAGGATTGGCCTCCATCAAAATCTTTTGAAGAGTGTTTGCCAAGGCACGGTGCTGAGTTTATAGCTATGCTTCCTTTTAGTGATTATACGCATCCAAAATCCGGTATTTTAAACCTTGCCACAAAGCTCCCTGATGTTTTGAAGCCAGATTTGGGTCCTAAAACATACATTGCTTATGGATCTTTAGAAGAGTTAAGTAGAGGTGATTCCGTGACAAAACTACACTGTGACATTTCAGATGCGGTCAATATTTTGACACACACATCTGAGGTAAAGACGCCGCTATGGCAAGCCAGAATCATAAAAAAGTTACAGAAGAAGTATGCGGTTGAAGATATGCGTCAGCTCTATGGTCAGAACAATAAAGCAGTAGGTTCACGTGGAAGAAAACGCAGAAAGCGCCACACAGGTGTTAGTGTGGATCGTAAAATCCCTGAAAAAGAAGATAGTGGTAGAGACTCGGCCTTACTAGGAAGTCAAGGAAAAGAAGAGAAACTAGATGAACAGCTAAGTCGGTCCCCGAGTTTGGAACAGTCGAGATCAGACACAGAAGTTTGTGTACAAGAATTCTCAGAACCCGTCAAAAGTAAATTAGATATAAATGCCAGCGAGCAGGAAATCTTCGATTCACCAAGGTTTCGGCAATTTGATCTCAATAATCACGATCCCAGTAGCTTGGTTCCTGTAAAAGATTGTCAGTCGATGCATTACGATAATGAGGAACAACAGTGCATGTCCTGTTCAGATATCAAAACTGACAAAATAGAGTCAGTTGAGAATGACATATCGAGTAAACATTCCGATCGAAATGATGTTCATTTGGAGACTCAATATGGGAGTGCTGTGTGGGACATATTTCGTAGGCAGGATGTACCGAAGCTAACAGAGTACCTAAAGAAACATCATAAAGAATTTCGCCACATAACTAATCTTCCAGTAAATTCTGTGATTCATCCTATTCATGACCAGATCCTTTATTTAAATGAGAAGCATAAGAAGCAACTAAAGCTGGAATATGGGGTTGAACCGTGGACGTTCGAGCAACATCTTGGGGAGGCTGTTTTCATACCTGCCGGATGCCCACATCAAGTGAGAAATCGAAAGTCTTGCATAAAAGTGGCTATGGACTTCGTTTCACCTGAGAATGTTCAGGAATGCGTTCGATTGACAGAGGAATTTCGGTTACTTCCAAAAAACCATAGATCTAAAGAAGATAAATTAGAGATAAAGAAGATGGCACTCTATGCTGCTGATGTTGCTACCGCTGAAGCCATTAAACTGATGGAAGCTAAATGA 5514 0.4149 MDETGDEDFNRCSRNGSGGWRCKEKALAGKTLCEKHHLYNLERTKEKGKKRKLEENSSQTGGGEVKWLFSDDHNGGGGTHVVEEFAGLFGGNEVNGGGVNFGFGGESFNLFGQQQIGGFGQGCGNLEFQLGDGVGNSVAGLGQPWNSVGVFGNAGGVVSGNRVGGVCENAFLGISSEGLVAGEAGFGSLYDRSFQALLCQGRVCDEDVSLIGGSNSTGFQGLVGESGYGFRSVGNLSQCGKFVGENVGSIVVPESSNKVIAAVGVDEGMEKLLSGGVCIDEKAKDEGLKPLIKMGRPKGSKNKSKKKDVNFGLDGGSVCGSDNNNVGTIGMSGVTILESGKPIFCGKADHEGVDLGEIGRTEKRGHVGDWKHGREIVLGVGYEVAGDDDISTPRKRRGRKGLIDKQENVDEVCNEVDGVSEVARPKKRGRPKGSVNRKKNVKEVTDEVGDSSEMARPKNIEEVSNEVGGASQVARPKSIEEVSNEVGGASEIARPKRRGRPKGSKCGTENVMEVSNEVVGDGKIARPKKRGRPKGSKCGKEIVLKGSDKVASAGEIERPKKRGRPKGSKKAKWVTYVCASKIEGADEIATQGSENKKLSILCQKGADKFASLTNKLGPALCTRNKLRGTVSEDQECQGMSVDIHLEVDNGTMRALPSGLEITTLVPLLCEQEKGIHSEAADHIENITTQPIVKRGRPKGSMSKKKKLEDQELPVQTLIQDAVQNDCNVKLKRGRPKGVKNKKSIAGEAGSKLLVKAKKRRGRPKGSGKKQKKIALPLPLHSRIERRGRPKGSGKKQKEIAFQLDSQIESQKSTCFDVVLSTIMPQQKHVHEESDSTLEDQVNKKEKSDVVLGCSKESGIEKITKGLMSESSNVHKRCSERLRKLLIDDKSSPYVEVEETTDHEHESSQDVEVEATIDHDHQSSQDVEVDETIDHDHNSSQDVEVDKTIDHDHKSSQDVEVEETIDHDPKNSQDVEVEETIDHGLESPHLMGESNTKRAPRNSRCHQCWNKSRTGLVACTKCKRKKYCYECLAKWYPHKTKEEVETACPFCLDNCNCRLCLKKTISILSGNGEADKDVKLQKLFFLLNKTLPLLQHIQREQRLELEVEASIHGSLSVEEEDIMQAVVDNDDRVYCDNCNTSIVNFHRSCPNLNCRYDLCLTCCMEIRNGVVHCEDIPASGNEVTLDTPELRNGVVHCEDIPASSNEVMLDTPPVTIAWRAEANGGIPCPPKARGGCGTAILSLRRLFEANWIDKLTKNVEELTVKYQPPVVDLSLGCLECCNFKEDAAQNSARKAASRVNDRDNFLYCPDAVEMGDEEFKHFQRHWIRGEPVIVKNVYKKASGLSWDPMVMWRAFIGARKVLKEEAASFKAIDCLDWCEVQINVFRFFKGYLEGRRYRNGWPEMLKLKDWPPSKSFEECLPRHGAEFIAMLPFSDYTHPKSGILNLATKLPDVLKPDLGPKTYIAYGSLEELSRGDSVTKLHCDISDAVNILTHTSEVKTPLWQARIIKKLQKKYAVEDMRQLYGQNNKAVGSRGRKRRKRHTGVSVDRKIPEKEDSGRDSALLGSQGKEEKLDEQLSRSPSLEQSRSDTEVCVQEFSEPVKSKLDINASEQEIFDSPRFRQFDLNNHDPSSLVPVKDCQSMHYDNEEQQCMSCSDIKTDKIESVENDISSKHSDRNDVHLETQYGSAVWDIFRRQDVPKLTEYLKKHHKEFRHITNLPVNSVIHPIHDQILYLNEKHKKQLKLEYGVEPWTFEQHLGEAVFIPAGCPHQVRNRKSCIKVAMDFVSPENVQECVRLTEEFRLLPKNHRSKEDKLEIKKMALYAADVATAEAIKLMEAK 1837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03054 1837 SMART cupin_9 1419 1800 IPR003347 -
Car04g03054 1837 MobiDBLite consensus disorder prediction 936 976 - -
Car04g03054 1837 MobiDBLite consensus disorder prediction 1 20 - -
Car04g03054 1837 MobiDBLite consensus disorder prediction 436 453 - -
Car04g03054 1837 CDD cupin_RmlC-like 1724 1772 - -
Car04g03054 1837 PANTHER ENBP1 PROTEIN 436 1835 - -
Car04g03054 1837 MobiDBLite consensus disorder prediction 1545 1577 - -
Car04g03054 1837 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 1002 1063 IPR018866 -
Car04g03054 1837 MobiDBLite consensus disorder prediction 1527 1590 - -
Car04g03054 1837 MobiDBLite consensus disorder prediction 892 911 - -
Car04g03054 1837 SUPERFAMILY Clavaminate synthase-like 1317 1824 - -
Car04g03054 1837 Gene3D Cupin 1305 1590 - -
Car04g03054 1837 Gene3D Cupin 1635 1809 - -
Car04g03054 1837 MobiDBLite consensus disorder prediction 749 772 - -
Car04g03054 1837 ProSiteProfiles JmjC domain profile. 1438 1800 IPR003347 -
Car04g03054 1837 ProSiteProfiles WRC domain profile. 6 50 IPR014977 -
Car04g03054 1837 MobiDBLite consensus disorder prediction 755 769 - -
Car04g03054 1837 MobiDBLite consensus disorder prediction 423 453 - -
Car04g03054 1837 MobiDBLite consensus disorder prediction 45 66 - -
Car04g03054 1837 MobiDBLite consensus disorder prediction 481 508 - -
Car04g03054 1837 Pfam WRC 10 45 IPR014977 -
Car04g03054 1837 SMART AT_hook_2 693 703 IPR017956 GO:0003677
Car04g03054 1837 SMART AT_hook_2 783 795 IPR017956 GO:0003677
Car04g03054 1837 SMART AT_hook_2 527 539 IPR017956 GO:0003677
Car04g03054 1837 SMART AT_hook_2 425 437 IPR017956 GO:0003677
Car04g03054 1837 SMART AT_hook_2 559 571 IPR017956 GO:0003677
Car04g03054 1837 SMART AT_hook_2 729 741 IPR017956 GO:0003677
Car04g03054 1837 SMART AT_hook_2 757 769 IPR017956 GO:0003677
Car04g03054 1837 SMART AT_hook_2 495 507 IPR017956 GO:0003677
Car04g03054 1837 Pfam JmjC domain, hydroxylase 1675 1783 IPR003347 -
Car04g03054 1837 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 436 1835 IPR045109 GO:0032454|GO:0033169
Car04g03054 1837 ProSiteProfiles Zinc finger RING-type profile. 1004 1050 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03054 Car-Chr4 58507852 58517375 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Car04g03054 JmjC 4.2e-19 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03054 K15601 - gsj:114384813 1382.85