Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03018 ATGCCTCCTCAACTCCGAACCAGAAGAAAAACAACACAAaacccgaacccgaaccaaaacccgaaccaaaacccgatcacaaaacccgaaaccgCTCGAGGTAGAAGAGGTAGACCAGCAAGAAATCGCAATCACAACACGATCGCTTTAGCGCGTGATCATGAAATCATCGATAACCGTCTCGGTCTAAACAATAACAACGAAACGAACCGAGTAGTAGTTGTagaagacgaagaagaagaagaggaaCATCACGCGCCTCAGGTTAGGGTTTCGAGAGATATTAAGAAGCAAGATATTATGGATGATGACTGTGATAGCGGTGGTCGGAGTGCTGATAAAGCTCCGGCAGCCGATGATGAAGGAACTACACCTCCCATTCCCGAAAAAGTGCAGGTAGGTGGTTCACCATTGTACAGAATAGATAGGAAGCTTGGGAAGGGAGGGTTTGGACAAGTTTATGTCGGTCGGCGTGTTGGAGCCGGAGCCGGAGCTCCCGAGGTAGCTTTGAAGTTTGAGCATAAAAGTAGTAAAGGATGTAATTATGGACCTCCTTACGAGTGGCAGGTTTACAATGTATTAGGTGGTAGTCATGGTGTTCCACGCGTTCATTACAAGGGACGGCATGGTGATTTCTATATTATGGTCATGGATATGCTTGGCCCTAGTTTATGGGATGTTTGGAATAACAAGACACACACGATGTCTGCTGAAATGGTGGCGTGTATAGCAATCGAGGCTATTTCCATATTAGAGAAAATGCATTCTAGAGGATACGTACATGGTGATGTAAAACCCGAGAACTTTTTGCTTGGCTCTCCGGGAACTCATGATGAGAAAAAGCTTTTTCTGGTTGATCTTGGATTAGCAACCCGTTGGCGTGATAATTCAACTGGTCTTCATGTTGAGTATGATCAACGTCCAGATGTATTTAGGGGAACAGTTCGTTATGCTAGTGTCCATGCTCATCTTGGTAGGACAGGTAGCAGAAGAGATGATTTAGAATCTCTTGCTTACACACTAATATTCCTTCTTCGTGGACGGCTACCTTGGCAAGGATTTCAGGGAGAAAATAAAGGATTTCTTGTGTGCAAGAAGAAGATGGCCACCTCGCCAGAAAATATGTGTTGCCTTTGTCCCGCACCTTTTCGGAAGTTTATTGAGTATGTAGTGAACTTAAAGTTTGAAGAAGAACCAAATTATGCAAAATGTATATCACTTTTCGATGGAATTGTTGGTCCAAATCCAGACATTAGGCCCATAAACACTGATGGTGCACAGAAGCTTATATATCAGGTTGGACAGAAGAGAGGACGATTGACCATGGAAGAAGATGATGATGAGCAGCCAAAGAAGAAAGTCAGAATTGGAATGCCAGCTACACAATGGATTAGTGTGTACAATGCACGCCGGCCTATGAAACAAAGATACCATTACAATGTTGCTGATTTGCGGTTGCCTCAACACATTGAGAAGGGATATGAAGATGGGTTATTTATCAGCAGTGTAGCTTGTTGTACTAATCTTTGGGCACTTATTATGGATGCTGGAACTGGTTTCAGTGCACAAGTTTACGAACTCTCGTCCTACTTTCTACACAAGGAATGGATTATGGAACAGTGGGAAAAAAATTATTACATTAGTGCCATAGCAGGATCTACTAATGGGAGCTCGTTGGTTGTAATGTCGAAAGGGACTCAATACTTGCAGCAATCCTATAAGGTCAGTGACTCATTTCCATTCAAGTGGATTAATAAAAAATGGAAAGAAGGATTTTACGTCACTGCTATGGCCACTGCTGGAAGTAGATGGGCAATTGTTATGTCTCGTGGTGCTGGATTTACAGACCAGGTTGTGGAGCTTGATTTCCTGTATCCTAGCGAAGGTATTCATCGAAGGTGGGACAATGGTTACCGCATCACTTCAACTGCTGCTACTTATGACCAGGCTGCTTTTGTTCTTAGTATTCCAAGAAGAAAACCGGCTGATGAAACTCAAGAAACGCTCCGCACATCTGACTTTCCTAGTACTCATGTCAAGGAGAAATGGTCAAAGAACCTCTATATTGCATCTATCTGTTATGGAAGAACAGTTTCATAA 2100 0.4129 MPPQLRTRRKTTQNPNPNQNPNQNPITKPETARGRRGRPARNRNHNTIALARDHEIIDNRLGLNNNNETNRVVVVEDEEEEEEHHAPQVRVSRDIKKQDIMDDDCDSGGRSADKAPAADDEGTTPPIPEKVQVGGSPLYRIDRKLGKGGFGQVYVGRRVGAGAGAPEVALKFEHKSSKGCNYGPPYEWQVYNVLGGSHGVPRVHYKGRHGDFYIMVMDMLGPSLWDVWNNKTHTMSAEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGSPGTHDEKKLFLVDLGLATRWRDNSTGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGFQGENKGFLVCKKKMATSPENMCCLCPAPFRKFIEYVVNLKFEEEPNYAKCISLFDGIVGPNPDIRPINTDGAQKLIYQVGQKRGRLTMEEDDDEQPKKKVRIGMPATQWISVYNARRPMKQRYHYNVADLRLPQHIEKGYEDGLFISSVACCTNLWALIMDAGTGFSAQVYELSSYFLHKEWIMEQWEKNYYISAIAGSTNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWKEGFYVTAMATAGSRWAIVMSRGAGFTDQVVELDFLYPSEGIHRRWDNGYRITSTAATYDQAAFVLSIPRRKPADETQETLRTSDFPSTHVKEKWSKNLYIASICYGRTVS 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03018 699 CDD STKc_CK1 139 408 - -
Car04g03018 699 MobiDBLite consensus disorder prediction 1 47 - -
Car04g03018 699 SMART serkin_6 139 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g03018 699 PANTHER - 99 673 - -
Car04g03018 699 Pfam Protein kinase domain 139 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g03018 699 ProSitePatterns Protein kinases ATP-binding region signature. 145 171 IPR017441 GO:0005524
Car04g03018 699 Gene3D Transferase(Phosphotransferase) domain 1 111 455 - -
Car04g03018 699 PANTHER CASEIN KINASE-RELATED 99 673 - -
Car04g03018 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Car04g03018 699 ProSiteProfiles Protein kinase domain profile. 139 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g03018 699 SUPERFAMILY Protein kinase-like (PK-like) 139 414 IPR011009 -
Car04g03018 699 MobiDBLite consensus disorder prediction 83 117 - -
Car04g03018 699 MobiDBLite consensus disorder prediction 76 133 - -
Car04g03018 699 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03018 Car-Chr4 58084134 58088345 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03018 139 294 EF-hand Containing Proteins AT1G35670 31.250 3.75e-09 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Car04g03018 Pkinase 8.5e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03018 - - tcc:18587997 1123.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03018 04 58084134 58088345 Car04g03018 04 58084134 58088345 ECH