Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02990 GACTACTACAGGCAATAGGTTTAGAAATACACGATGCATCTTTAGGTATTTCTGAATCTAAAATTGGAATTTACATAGGAAAATTCACGGGAAAGTATATCTTGTCATCATACATTATAGTGAGATTTGTGTTGGGTCTCATTGTTTTCTTTACAAAATTGATAAATATATATCGAACAAGGCATACATCAATGTATGAAAATATagaagattttcttcaaggtaactctctcgtgccaataaggtattcttacaaagagataaagaatatgactaaaagttttaaggacaagttgggtgaaggaggctatggtacagtttataagggaacattacgcagtgggcctttggtagccataaaaatgttgggtaaatctaagggtaatggacaagatttcattaatgaagttgcaaccataggaagaatacatcacaccaatgtggtacgacttattggattttgtgttgagggatcaaaacgtgctcttgtttatgatttcatgcccaatggatctcttgatagatatatttcctctagagatgatactatttctttaacatataagaaaatgtatgagatatctcttggagtggctcgtggtattgcttatttgcatcaaggttgtgacatgcaaattttacattttgatatcaagcctcacaacatccttcttgacgaagacttcatctccaaggtttcagactttggtcttgcaaaactttatccagttgacaatagcattgtatctttgactgctgcaagaggaacaattggttacatggctcctgaattgttttacaaaaatattggtggagtttcttataaggctgatgtgtatagctttggaatgctcttgatggaaatagcaaataggagaagaaatttgaactcacatgcagatgattcaagccaaattttctttcccttttggatttacaatcgattgattgaagaaagggagatagaaatattaggagatgctactgatgaggacaagaataatgtgaaaaagatgttcataattgctctatggtgtatacaattgaaccccagtgatcgtccttctatggagagagtaatagaaatgcttgaaggagatattgaAAATATTAAAATTCCGCCAAAGCCTTCTCCATATCCAACTGAAGAAGAAACTATATCTAGAGAATCTATATCGGATGATGATATCTCTGGGTCAATTAGTTTTCTTGAAGAAACT 1220 0.0811 LLQAIGLEIHDASLGISESKIGIYIGKFTGKYILSSYIIVRFVLGLIVFFTKLINIYRTRHTSMYENIEDFLQGNSLVPIRYSYKEIKNMTKSFKDKLGEGGYGTVYKGTLRSGPLVAIKMLGKSKGNGQDFINEVATIGRIHHTNVVRLIGFCVEGSKRALVYDFMPNGSLDRYISSRDDTISLTYKKMYEISLGVARGIAYLHQGCDMQILHFDIKPHNILLDEDFISKVSDFGLAKLYPVDNSIVSLTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEIANRRRNLNSHADDSSQIFFPFWIYNRLIEEREIEILGDATDEDKNNVKKMFIIALWCIQLNPSDRPSMERVIEMLEGDIENIKIPPKPSPYPTEEETISRESISDDDISGSISFLEET 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02990 406 Pfam Protein kinase domain 95 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02990 406 ProSiteProfiles Protein kinase domain profile. 92 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02990 406 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 26 387 - -
Car04g02990 406 ProSitePatterns Protein kinases ATP-binding region signature. 98 120 IPR017441 GO:0005524
Car04g02990 406 MobiDBLite consensus disorder prediction 371 406 - -
Car04g02990 406 PANTHER RUST RESISTANCE KINASE LR10-RELATED 26 387 IPR045874 GO:0004672
Car04g02990 406 Gene3D Phosphorylase Kinase; domain 1 70 166 - -
Car04g02990 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Car04g02990 406 MobiDBLite consensus disorder prediction 392 406 - -
Car04g02990 406 Gene3D Transferase(Phosphotransferase) domain 1 167 372 - -
Car04g02990 406 SMART serkin_6 92 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02990 406 SUPERFAMILY Protein kinase-like (PK-like) 77 364 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02990 Car-Chr4 57596406 57597625 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02990 56 376 Receptor kinase-like Gene Family AT4G18250 48.936 4.11e-109 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Car04g02990 Pkinase 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02990 - - mtr:MTR_1g027050 669.077