Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02986 ATGGCAGGAGCAAATAGTTTGATGATGTTTTTGCTTCTTATGTTGCTTATAAACAATATTGGCAGTGCTTACGACGAGTGTAGAGAATTATCTTGTGGACTATACAAACCTCTTATTAGATTTCCCTTCCAACTTATCAAAGAGCCACAAGATCATTGTACAAATCCCAAGTTTTGCTTATATTGTACTCAAACTAAAAACACCATGATTCATCTCTCTACCACTTCAGGTCAAATCAAATTCCTTGTCTATGACATAGATTACCACCGACACAAGATGTTAATTACCGACCCAGAAAATTGTCTTCCAAAAAAGTTTTTGCAACTCAACAATTCATCATTTCTACCTTACAAATTGGATCCACAATCAATGACAACAAAATACTTTTTCAATTGCTCTTCAGTAAAGAAACCACACTTGAGAAACTATGAACAAACACTCAAGGAGTCACAAGATATGATCACTTGTCCAATTTATATGTTTAATGCATATGACAGTGTCCTTCAATTGGACTTTATATCATGTACCAAGATGTTCGAAATCAACGCGTCAACCACGGTACAAGGCAAATTGAGTTTAAGTTGGCCCAATCCAAATTGTAACAAGTGTAAAGAAAAAGGCATGAAATGCAAATGGAAGAACAATGGTAGTAATAAAGATGAAATTGAATGTTTTGACTGCAAAAAAAAAGTGAAAACAATTCACATACCAAGGTCTCTTATTTTTGCTGCAACAGGTTCAATTCTCTTGGGGCTGGTTCTCATATCATTATTTAAGATACATCTCTATTTTAGAAAGAAAGAAGAGGATCAAGTAAGAGTTGATAACTTTTTAGAAGATTATAGAGCACAAAAACCTGCTAGATTTTcctatgctgacatcaaaagaataacaagtgagtttagggaaaaacttggagaaggagctcatggaactgtgtttaaaggaaaactctccaccgaaattcttgtagctgtcaaaatgctaaacagtacacagggagaaggaaaagagttcatcaatgaagttggaattatgggaaaaattcaccacatcaacgtcgttcgtttgcttggattttgtgcagatggaatccaccgtgctcttgtgtacaatttgtttccaaatggttcgttacagagctatatatttcaaccagataacaaggaccattttttggggtgggagaaactgcaacaaattggtgttggaatagccaaaggaattgagtatcttcatcaaggttgtaatcatccaatcattcactttgatatcaaccctcataatgttttgctagatgactcattcactccaaaaatttcagattttggtctcgcaaaattatgttccaagaatcttagtattgtgtctatgacagcagctaaaggaacattgggatacatggcgcctgaagttctgtctagaaattttggaaatgtgtctcttaaatcagatatttacagttatggaatgttgttgctagaaatggttggaggaaggaagaatgtagacatgtcATCTGCAGAAACTTTTCATGTGTTATATCCAGAATGGATCCATAACTTATTAGAAGGAGATGTGCATATTCATGTTGAGGATGAAGGTGATGCTAAAATTGCAAAGAAACTTGCAATTGTAGGACTTTGGTGCATTCAATGGCAACCAATAAATCGTCCATCTATAAAAGCTGTTGTGCAAATGTTGGAAACTGGAGAGGATAATCAGTTAACTGTGCCTCCTAATCCTTTTCACTCGACAACTTTGGCGAGAAGAACTTTTCAAATGGAAGTGATTCAGGAATAA 1803 0.2219 MAGANSLMMFLLLMLLINNIGSAYDECRELSCGLYKPLIRFPFQLIKEPQDHCTNPKFCLYCTQTKNTMIHLSTTSGQIKFLVYDIDYHRHKMLITDPENCLPKKFLQLNNSSFLPYKLDPQSMTTKYFFNCSSVKKPHLRNYEQTLKESQDMITCPIYMFNAYDSVLQLDFISCTKMFEINASTTVQGKLSLSWPNPNCNKCKEKGMKCKWKNNGSNKDEIECFDCKKKVKTIHIPRSLIFAATGSILLGLVLISLFKIHLYFRKKEEDQVRVDNFLEDYRAQKPARFSYADIKRITSEFREKLGEGAHGTVFKGKLSTEILVAVKMLNSTQGEGKEFINEVGIMGKIHHINVVRLLGFCADGIHRALVYNLFPNGSLQSYIFQPDNKDHFLGWEKLQQIGVGIAKGIEYLHQGCNHPIIHFDINPHNVLLDDSFTPKISDFGLAKLCSKNLSIVSMTAAKGTLGYMAPEVLSRNFGNVSLKSDIYSYGMLLLEMVGGRKNVDMSSAETFHVLYPEWIHNLLEGDVHIHVEDEGDAKIAKKLAIVGLWCIQWQPINRPSIKAVVQMLETGEDNQLTVPPNPFHSTTLARRTFQMEVIQE 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02986 600 SUPERFAMILY Protein kinase-like (PK-like) 282 569 IPR011009 -
Car04g02986 600 PANTHER RUST RESISTANCE KINASE LR10-RELATED 15 600 IPR045874 GO:0004672
Car04g02986 600 Pfam Wall-associated receptor kinase galacturonan-binding 27 97 IPR025287 GO:0030247
Car04g02986 600 ProSiteProfiles Protein kinase domain profile. 299 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02986 600 Gene3D Phosphorylase Kinase; domain 1 273 373 - -
Car04g02986 600 ProSitePatterns Protein kinases ATP-binding region signature. 305 327 IPR017441 GO:0005524
Car04g02986 600 PANTHER RECEPTOR-LIKE KINASE 15 600 - -
Car04g02986 600 Pfam Protein tyrosine and serine/threonine kinase 300 568 IPR001245 GO:0004672|GO:0006468
Car04g02986 600 Gene3D Transferase(Phosphotransferase) domain 1 374 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02986 Car-Chr4 57305707 57308100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02986 30 582 Receptor kinase-like Gene Family AT1G66910 33.443 5.78e-95 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Car04g02986 PK_Tyr_Ser-Thr 1.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02986 - - cam:101495452 909.442