Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02982 ATGGAAATGAAACAAAATCTCACACAATTATTCCAAATTTTCATACTCACAATACCCATGCTAAGAGTATTAGCATCTAATGAATCCCTTTATAAATCGCTACCCGGTTGCAAAAACACATGTGGAGATGTTAAAATTCCATATCCATTTGGCATATCCAACACATCATCACCAAATGAAAATCTCTGTATTCTAGAACCCAAATTTAATCTCACATGTGAGAACGACACAAAATTAATTTGGGGCAATATACAAGTTACCAACATTAACATCACCGAAGGACAACTTGAAATGTTGTTTTTTGTGTCGAGTTATTGTAATAGCGAAAATTCCAATAGACCCACGTTAGGCACTGCCGGTTTCACCATATCAAGCAAAGAAAACAAATTTATAACCGTTGGTTGTGATAGTTACGGTTATCTCAATAGTATTGACAACAAAGAAATATATTCAACGGGTTGCTTAACAAGGTGTTACGGTAATAGAAATCAAATTGAAAACGGAACATGTTCGGGTATTGGTTGTTGTCAAGTTGATATTCCACCAAATATGAGAAATATAAGTGTACAAGTTTTTGATTTTCCTAATTCAACCGATTCTTTTGGATGTAGTAGTTCTTTTATTGTCAAAGATGGATATTATAATTTTTCGGTTACTGATTTGAACGAATTTCCTTATAAGAATGTTCCTCTGATTATTGATTGGAGTGTTGGAACAAAAAATTGTGAGGCCTCAAAGGGTGATGATGATTATGCTTGCAAGGCAAATAGTGATTGTGAAGATGATATTGAGGGCATTGATTTTGGTTATCGATGTAAATGTAAGCGCGGTTATGATGGAAACCCGTATCATCCAGATGGCTGCACAGACATCGACGAATGTAAGCCATTGAATAACCGATGCGACAATGGTCAACGTTGTAACAACACGGAAGGAGGTTTCGAATGTTTATGTCTTGAAGGATACTCCAAAAATCGAAATGGAAAAGGGTGCCATAGTCGAAATATAGTTGCAAAAGTTGCCATTGGAGCAAGTGCAGGAATCATGATTCTATTTTTGGCGATTTCATCGCTATACTTAACACACCAAAGAAGGAAACTCATGAAACTAAAAAAAAAATTCTTCCAACAAAACGGTGGTTTCATTTTACTACAACAACTCTCCACAAGAGAAGATTCATCACAATCAGCTCAAATATTCACAGAACAGGAACTCAAAAAAGCCACAAACAACTACGATGAAAGCTTAATCATCGGTCGAGGTGGTTTCGGTACAGTCTTCAAAGGCTTTTTATCAGACAACAAAATCATTGCTGTCAAAAAATCAAAAATAATCGACGAAAACCAAATCGAACAGTTCATAAACGAGGTTGTTGTTCTGTCTCAAATAAATCATAGGAATGTTGTGAAACTTATAGGTTGTTGTTTGGAAACAGAAGTTCCTTCATTGGTCTATGAATTCGTTAGCAACGGTACGCTTTTCGATTTCATACAAAATACGAAAGATCAAACAAATAACACGACATGGAAAACACGTTTAAGAATTGCAGCAGAAGCAGCTGGTGCATTATCTTATCTACATTCTTCTGCAGCAATACCAATTATTCATAGAGATGTTAAAAGTACCAACATTCTCTTAGATGAAAATTTCACTACAAAAGTTTCTGATTTTGGTGCTTCAAGATTAATTCCACTTGATCAAACAGAAATAGCAACAATGGTGCAAGGAACACTTGGTTATTTAGATCCTGAGTATATGCAAACACATCAACTAACTGAGAAAAGTGATGTTTATAGTTTTGGTGTTGTTCTAGCAGAGCTTTTAACAGGGGAGAAACCAATTTCTTTTAATAGGCCAGAAGAAAAAGTTAGTCTTGCTATGAATTTTCTGTCTTGTTTGAAAAAAGATGGAATTTTGGAAGCTATTCAAGATGGAATGTTGAATGATGAAAACAAGAAGGAGATTAAGGAGGTCTGTTTTCTTGTTGCAAGGTGTTTGAGGCTTAGAGGGGAAGAAAGGCCTAGTATGAAGGAAATTGCTATGGAATTGGATGGTATAAGGTTAACGGAGAAACATCATTGGAATGATGGAGAAGCGAATTTTGAGGAGAGTCAATATTTGCTTCATTTGGGATCTTCTAGTGTTCTTGAAATTGGTGATAGTAGTAGTAACTTTGGATATACTGGTGGGTATGATAGTTTGAAAGATCAACCATTGATTGCTTTGGATGATGGAAGATGA 2241 0.3543 MEMKQNLTQLFQIFILTIPMLRVLASNESLYKSLPGCKNTCGDVKIPYPFGISNTSSPNENLCILEPKFNLTCENDTKLIWGNIQVTNINITEGQLEMLFFVSSYCNSENSNRPTLGTAGFTISSKENKFITVGCDSYGYLNSIDNKEIYSTGCLTRCYGNRNQIENGTCSGIGCCQVDIPPNMRNISVQVFDFPNSTDSFGCSSSFIVKDGYYNFSVTDLNEFPYKNVPLIIDWSVGTKNCEASKGDDDYACKANSDCEDDIEGIDFGYRCKCKRGYDGNPYHPDGCTDIDECKPLNNRCDNGQRCNNTEGGFECLCLEGYSKNRNGKGCHSRNIVAKVAIGASAGIMILFLAISSLYLTHQRRKLMKLKKKFFQQNGGFILLQQLSTREDSSQSAQIFTEQELKKATNNYDESLIIGRGGFGTVFKGFLSDNKIIAVKKSKIIDENQIEQFINEVVVLSQINHRNVVKLIGCCLETEVPSLVYEFVSNGTLFDFIQNTKDQTNNTTWKTRLRIAAEAAGALSYLHSSAAIPIIHRDVKSTNILLDENFTTKVSDFGASRLIPLDQTEIATMVQGTLGYLDPEYMQTHQLTEKSDVYSFGVVLAELLTGEKPISFNRPEEKVSLAMNFLSCLKKDGILEAIQDGMLNDENKKEIKEVCFLVARCLRLRGEERPSMKEIAMELDGIRLTEKHHWNDGEANFEESQYLLHLGSSSVLEIGDSSSNFGYTGGYDSLKDQPLIALDDGR 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02982 746 Gene3D Laminin 293 331 - -
Car04g02982 746 ProSiteProfiles EGF-like domain profile. 290 332 IPR000742 -
Car04g02982 746 ProSiteProfiles Protein kinase domain profile. 412 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02982 746 SUPERFAMILY EGF/Laminin 288 336 - -
Car04g02982 746 SMART egfca_6 290 332 IPR001881 GO:0005509
Car04g02982 746 CDD EGF_CA 290 331 - -
Car04g02982 746 Gene3D Laminin 239 292 - -
Car04g02982 746 Gene3D Phosphorylase Kinase; domain 1 382 487 - -
Car04g02982 746 Pfam Wall-associated kinase 168 275 IPR013695 GO:0004674|GO:0016021
Car04g02982 746 ProSitePatterns Calcium-binding EGF-like domain signature. 290 316 IPR018097 GO:0005509
Car04g02982 746 ProSitePatterns EGF-like domain signature 2. 316 331 IPR000742 -
Car04g02982 746 ProSitePatterns Protein kinases ATP-binding region signature. 418 441 IPR017441 GO:0005524
Car04g02982 746 SMART egf_5 241 289 IPR000742 -
Car04g02982 746 SMART egf_5 293 332 IPR000742 -
Car04g02982 746 CDD STKc_IRAK 418 686 - -
Car04g02982 746 SMART serkin_6 412 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02982 746 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 307 318 IPR000152 -
Car04g02982 746 SUPERFAMILY Protein kinase-like (PK-like) 393 682 IPR011009 -
Car04g02982 746 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Car04g02982 746 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 18 713 IPR045274 GO:0007166
Car04g02982 746 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 18 713 - -
Car04g02982 746 Pfam Wall-associated receptor kinase galacturonan-binding 37 96 IPR025287 GO:0030247
Car04g02982 746 Pfam Protein kinase domain 414 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02982 746 Gene3D Transferase(Phosphotransferase) domain 1 488 699 - -
Car04g02982 746 Pfam Calcium-binding EGF domain 290 331 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02982 Car-Chr4 57241636 57247859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02982 30 746 Receptor kinase-like Gene Family AT1G21230 45.479 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Car04g02982 Pkinase 6.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02982 - - gmx:100781051 933.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02982 04 57241636 57247859 Car04g02982 04 57241636 57247859 ECH