Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02980 ATGTCAAATTTTCACAATTTCCCTCTTCTACTAACTCTATTCTTTCTCCTATTACCAAATCCAACAATATCCAAAAATGGATGCACCGATAAATGCGGAAGCGTTCACATTCAATTTCCATTTAATCTCAAAAACAACAACACAAACCAAACCAATGCTCACGGATTCGATTTATCATGTACAAATGAACACGAAACCGTGTTAGAATTTCCCACAATTCCACTCAAACTTTTCATCAAACGCATAGACTACATATCTCAAAGGTTCCAAATCTACGACCCAAAAAACTGTCTTTCAAGTCAACTATTAAAGTTAAAAAATTTATCAGTTTCGCCGTTTCGATTTCACTTCCACGAGTATAACATACAGCGCAACGTTTCGTTCTTTCGTTGCGATTCGAATAATGGGTGTTCGATTTTGCAACGTGATTTTGGCGGTGATTTTATTGATCCTGAATTGGTTTCATGTAGAAAAGTTAGTGATGTTATGTCGGTGGGTTGGGTGGTTGAGGAATGGGATGAAGATGATTTGACAGAGAGTTTGATTATGGAATGGTCTAAACCGAATTGTAGTTTTTGTGAAGTTCAAGGGCAAAAATGTAAATGGAAAGATGGTGGTGGTAGTAGAGGTGGTGAAGTTGAATGTTTTGTTTGTCCTTCAAGTGGGATTGCAAGATCTACTGTTCTTCTAATTACTGCTGGGGTCATAGTTGGTTCAATACTTTTGCTACTATTGGTAAATGGATTGCTTCGCCTTTATCGCTATTTTAAGATGAAAGGAGATGACTTAGATAGGATAGAGAAATTCTTGGAAGATTATAGGGCAATGAAAcctacaagattcacttatgctgatattaagagaataacaaatggtttcaaggagagtttaggagaaggagctcatggaacagtgttcaaaggcatgctgtcccaagaaattcttgtagctgtgaaggtactcaatgaaacacaaggagatggaaaagatttcatcaatgaagttggaacgatgggaaaaattcatcatgttaatgttgttcgcttgctcggattctgcgctgatggattccaccgtgctcttgtctatgatttctttccaaatgggtcattgcaaaatttcttggctccattggagaataaagatgtttttctcggttgggagaagttgcaacaaattgcgcttggtgttgcgagagggattgagtatctccatattggttgtgatcatagaattcttcattttgatatcaatccacacaatgtgttaatagatgataacttgagtcctaagattactgattttggacttgctaaattgtgtccgaaaaatcaaagcacagtgtctatgacaacagctagaggaaccttaggctacattgcgcctgaagttttctcaagaaactttggaaatgtatcttataagtctgacatttacagttatggaatgttgttgctcgagatggttggaggaagaaagaatactaaTATGTCATCCGAGGAAACATTCCAAGTTTTGTACCCCGAATGGATCCATAATCTTATCGAAGATAAAGATGTACATGTTAATATTAATGTTGAAGATGAGGGAGACATTAGAATTGCAAAGAAACTTGCACTTGTAGGACTTTGGTGTATTCAATGGAATCCGGTGGATCGTCCATCCATGAAAACTGTGGTACAAATGCTTGAAGGAGAAGGAGAAAAGTTAATGGCACCCCCTACTCCTTTTGACTCTATTGGTTCTACTAGATCAAATGCAATTATTCCAACTAGACATTTAAATTTTGAGTTAGAAGTTATTCATGAAGTAGAGTAA 1818 0.2338 MSNFHNFPLLLTLFFLLLPNPTISKNGCTDKCGSVHIQFPFNLKNNNTNQTNAHGFDLSCTNEHETVLEFPTIPLKLFIKRIDYISQRFQIYDPKNCLSSQLLKLKNLSVSPFRFHFHEYNIQRNVSFFRCDSNNGCSILQRDFGGDFIDPELVSCRKVSDVMSVGWVVEEWDEDDLTESLIMEWSKPNCSFCEVQGQKCKWKDGGGSRGGEVECFVCPSSGIARSTVLLITAGVIVGSILLLLLVNGLLRLYRYFKMKGDDLDRIEKFLEDYRAMKPTRFTYADIKRITNGFKESLGEGAHGTVFKGMLSQEILVAVKVLNETQGDGKDFINEVGTMGKIHHVNVVRLLGFCADGFHRALVYDFFPNGSLQNFLAPLENKDVFLGWEKLQQIALGVARGIEYLHIGCDHRILHFDINPHNVLIDDNLSPKITDFGLAKLCPKNQSTVSMTTARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNMSSEETFQVLYPEWIHNLIEDKDVHVNINVEDEGDIRIAKKLALVGLWCIQWNPVDRPSMKTVVQMLEGEGEKLMAPPTPFDSIGSTRSNAIIPTRHLNFELEVIHEVE 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02980 605 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 42 605 - -
Car04g02980 605 Gene3D Transferase(Phosphotransferase) domain 1 366 572 - -
Car04g02980 605 Gene3D Phosphorylase Kinase; domain 1 265 365 - -
Car04g02980 605 SUPERFAMILY Protein kinase-like (PK-like) 272 564 IPR011009 -
Car04g02980 605 Pfam Wall-associated receptor kinase galacturonan-binding 28 93 IPR025287 GO:0030247
Car04g02980 605 ProSiteProfiles Protein kinase domain profile. 291 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02980 605 ProSitePatterns Protein kinases ATP-binding region signature. 297 319 IPR017441 GO:0005524
Car04g02980 605 PANTHER RUST RESISTANCE KINASE LR10-RELATED 42 605 IPR045874 GO:0004672
Car04g02980 605 Pfam Protein kinase domain 294 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02980 Car-Chr4 57193758 57196635 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02980 235 576 Receptor kinase-like Gene Family AT1G66910 48.588 4.19e-105 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Car04g02980 Pkinase 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02980 - - gmx:100819302 863.988