Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02979 ATGATAACTTGTTACAATATTTCTGCGGTGATGATTCTCATCATCGTGGTTTGCAACACAGTGATTTGGGGAGTTAATGGTTGTATTGGGAGGGATTTGAGGTGCGGACGTCACGGCCCGCCAATTCGATTTCCCTTCAGACTTAAAGACACAGAATATGGATGTGGTTATCCTGGCTTTGATCTTACTTGTTCACACACAAACAAAACTCTACTTAAGATTCCTACACATCCTCATCCAGTAATACTTCAAGTCACAAGCATAGATTATAAATTACAACTTTTACACGTATCTGACCCTGAAAATTGCCTTTCAAAACAGTTTTTAAAGCTCCTTCAATCACCTATTAGTATTACTCCTTTTCAATTTGAGTCATCCGACCATAATGATAGCTTCACTTTCCTCCACTGTAGTTCACTTTTCTGCCCGGTTTATATTGAATATTCTGACAACAGACTCCTTGATCAGAGTTTTGACCTAATACACTGCACCAAGATTTTAGATATTTCTTCGTCAGTGTTCTTGCGGGAAGGTGAGAATGATTTGGTTTTGAAATGGTCGAAACCCAATTGTAGAAAGTGCGAAATAAAAGGAAAGATGTGTAAACTGAACAATAACGGAACTGAAGATGAAATAGAATGTTTTGACCGTCATCACAAATCAACAAAGAAGATACTTTTACTTGCCGCAGTTGTGTTCTTTGGTTCAATTTTGGTGACATTGATTCTTAGAGCGAGTTTGTGTCTCTATACCCATTTTAAactaaaaggaggaagaaagaaTATAGGGAAGTTGTCTGAAGAAAATTTTCAAGTTCTGTATCCAGAATGGATTCACAATCTGCTTGAAGGGCGAGATATGCAAGTGAATATTGAGGGGGAGGGAGATGATATGATTTTAAAGAAACTTGCAATTGTAGGACTTTGGTGCATTCAGTGGCACCCAATAAATCGTCCATCTATAAAAGCTGTGCTCCAAATGTTAGAGGCTCAAGATGAAGGAAACTTGACTGTGCCTCCAAACCCTTTTAACTCCACAACTTCTAGAGTTGGTGATATCCCGAAAAAGTATTCAACCTTAGAGTTGGAAGCAATACATGAATGA 1104 0.3741 MITCYNISAVMILIIVVCNTVIWGVNGCIGRDLRCGRHGPPIRFPFRLKDTEYGCGYPGFDLTCSHTNKTLLKIPTHPHPVILQVTSIDYKLQLLHVSDPENCLSKQFLKLLQSPISITPFQFESSDHNDSFTFLHCSSLFCPVYIEYSDNRLLDQSFDLIHCTKILDISSSVFLREGENDLVLKWSKPNCRKCEIKGKMCKLNNNGTEDEIECFDRHHKSTKKILLLAAVVFFGSILVTLILRASLCLYTHFKLKGGRKNIGKLSEENFQVLYPEWIHNLLEGRDMQVNIEGEGDDMILKKLAIVGLWCIQWHPINRPSIKAVLQMLEAQDEGNLTVPPNPFNSTTSRVGDIPKKYSTLELEAIHE 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02979 367 Pfam Wall-associated receptor kinase galacturonan-binding 34 99 IPR025287 GO:0030247
Car04g02979 367 PANTHER RECEPTOR-LIKE KINASE 21 256 - -
Car04g02979 367 PANTHER RECEPTOR-LIKE KINASE 256 367 - -
Car04g02979 367 PANTHER RUST RESISTANCE KINASE LR10-RELATED 21 256 IPR045874 GO:0004672
Car04g02979 367 PANTHER RUST RESISTANCE KINASE LR10-RELATED 256 367 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02979 Car-Chr4 57169846 57178774 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02979 32 216 C3H Transcription Factor Family AT2G25410 32.394 4.80e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02979 - - adu:107468090 210.305