Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02975 ATGTTTGATATCTCTCTTTCTCCTCTCTCAACCATGTCTTGTAAAATACTTGTCAATCTAATTGTTATCATGATCCTCCTATACCCTCTTCCTTGTCTAACAAAACCAAATCACCAATGTCCTCCTTCATCTTGTGGCAACATACAAAACATCAGCTACCCTTTTCGACTAAAAGGCGATCGCGAAAATTGTGGAGATCCTAATTATGAACTATCATGTGTCAACAATCAAACACTACTAAATCTACACAATGGAAAATACATTGTAAACTCCATCAACTTCAATAATTCAACAATAAGGATCACAGATTTTGGTCTCAACCAAAAAAATTGCTCTTCCATTCCTCTCTACACTTTAACAAATAATAACTTCACCAATGGAAAACCTTATAGATTTTTATTAAGTGACAATAATAACTTAGAAACCATAGCATTTATGACATGTGAAGCCTCAATTATTTCACCTATTTACATGGACACTTCAGCTTGTATTAAACATTTCAACTCTTCCAATTCTTCTTTCTTTGGTATATACACTTATGCTGTACTTGGTGACTTGATGATTTCTGAATTGGAAGATTCATGCAGCATACTTGTAATGGTTATGACTTCAAATTTGAGCAAATTTGACAGCAAACTTTCATATGTGAATATCCATCAACAACTTGTTTATGGATTGGAGCTTTCTTGGAGTGAGATATTATGCAAAGAGTGTAAAGGCAGGGGATATTGTAAATTGAATAACAAAAATGAAGTCATTGGTTGTTCAAGTGGTAGACCTTGTAGTCATGACTATATACCATCTTTTAAATGTGCTTTAAAAGAGGCAATTGATGCAGTCAAAGATGTGGCTAAAGGTTCTCACAGATTAGTCGCTATCATTGGAGTAATTCTTGTTATAAGAATTATAGGTGGGTTACTATTTGTCCCAATGTATATGATATATAAATGGAGAAGGAGACATTTATCTGCATATgattcagttgaagagtttctgaaaactcacaacaatcttatgccaataagatactcttactcggacataaaaaagatcacaaaaggattcaaggataaacttggtgaaggtggctatggttctgtatacaaaggacaacttcgaaatggtcacctagtagcaatcaagatgctaggtggaaagtctagagctaatggacaagaatttatcaacgaagttgctactattggaacaatccaccatgtcaatgttgttcatcttattggcttttgtgttgagaaatcaaaaagagcacttgtctatgaattcatgcctaatggttcacttgacaaacacattttctcaagagaaaaaatggtacctttgagttgtgaaaaaatgtttgatatagctcttggtgtagcacatggtattgaatatctacatagagggtgtgacatgaggattttgcattttgacataaagccacataatattcttcttgatgtgaatttcactccgaaggtttcagattttggactagcaaagttatatccgattgacaatagcattgtgtcgctcacggcggcaagaggaactatgggatacatggccccggagttgttttataaaaacattggaggagtatcgtacaaagcagatgtttatagttttggtatgttgctaatggaaatggcaagtaggaggaggaatatgaatgagggtgaagatcataagagtcaagtttattttccttcttgggtttatgaccaatttagtgaagggagagaaatagaaatggggaatggtacagaggaggaggaaaaactattgaagaaaatgataatagttgcattgtggtgtatacaaatgaaaccaagtgatcgtccttcaatgaacaaagtggttgagttacttgaaggagatgttgagtcacttcaaatgcctcctaagccattTCAAACTCCAAAAGGAATGCCTATACAAGGCATTGGACAATTCAGAAATCTACCTTGGTTGCTACCTGGAGAATCTACAAATTCACTTACCATTGTTATAAATAGACGTTAA 2025 0.1807 MFDISLSPLSTMSCKILVNLIVIMILLYPLPCLTKPNHQCPPSSCGNIQNISYPFRLKGDRENCGDPNYELSCVNNQTLLNLHNGKYIVNSINFNNSTIRITDFGLNQKNCSSIPLYTLTNNNFTNGKPYRFLLSDNNNLETIAFMTCEASIISPIYMDTSACIKHFNSSNSSFFGIYTYAVLGDLMISELEDSCSILVMVMTSNLSKFDSKLSYVNIHQQLVYGLELSWSEILCKECKGRGYCKLNNKNEVIGCSSGRPCSHDYIPSFKCALKEAIDAVKDVAKGSHRLVAIIGVILVIRIIGGLLFVPMYMIYKWRRRHLSAYDSVEEFLKTHNNLMPIRYSYSDIKKITKGFKDKLGEGGYGSVYKGQLRNGHLVAIKMLGGKSRANGQEFINEVATIGTIHHVNVVHLIGFCVEKSKRALVYEFMPNGSLDKHIFSREKMVPLSCEKMFDIALGVAHGIEYLHRGCDMRILHFDIKPHNILLDVNFTPKVSDFGLAKLYPIDNSIVSLTAARGTMGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASRRRNMNEGEDHKSQVYFPSWVYDQFSEGREIEMGNGTEEEEKLLKKMIIVALWCIQMKPSDRPSMNKVVELLEGDVESLQMPPKPFQTPKGMPIQGIGQFRNLPWLLPGESTNSLTIVINRR 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02975 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Car04g02975 674 Gene3D Phosphorylase Kinase; domain 1 327 428 - -
Car04g02975 674 SMART serkin_6 353 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02975 674 SUPERFAMILY Protein kinase-like (PK-like) 334 624 IPR011009 -
Car04g02975 674 Pfam Wall-associated receptor kinase galacturonan-binding 40 103 IPR025287 GO:0030247
Car04g02975 674 Gene3D Transferase(Phosphotransferase) domain 1 429 639 - -
Car04g02975 674 ProSiteProfiles Protein kinase domain profile. 353 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02975 674 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Car04g02975 674 CDD STKc_IRAK 359 626 - -
Car04g02975 674 Pfam Protein kinase domain 356 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02975 674 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 18 277 - -
Car04g02975 674 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 293 643 - -
Car04g02975 674 PANTHER RUST RESISTANCE KINASE LR10-RELATED 18 277 IPR045874 GO:0004672
Car04g02975 674 PANTHER RUST RESISTANCE KINASE LR10-RELATED 293 643 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02975 Car-Chr4 57088022 57091842 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02975 1 637 Receptor kinase-like Gene Family AT1G66910 35.143 2.06e-108 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Car04g02975 Pkinase 3.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02975 - - hbr:110665770 696.041