Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02974 ATGTGGGGCAATTACTCTAGACTAATATTTCTTCCATTCTTTTGCTTTCTTTTGAGTGTAAATTACTACACTAACCTTGCCTTAGCTAATATTCAATGCATGAAAACAAGGTGTAATCACAATGATGCTCCTACAATTCAATACCCTTTTAAACTTCAAAACATTCAACCACAAAATTGTGGCAAGATTGGGTTTGATCTTTCATGCAATGAGAATCACCAAACCATATTAGAATTGCCAATTTCAATAAATTTTGTTGTCAAAAAAATTGATTACAAGTCCCAAGAAATTCATGTGACTGACCCAAATGAATGCATTCCAAGACTCatttcacatttaaatatatcttccactccttttcatttcattgacaattccaactccaatttcacttttttcaattGTTCATCCATGAACACTGCTTTACAATCTCATTATTCATCCATTAAATGTCTTTCTTCTCATGGATACCATGTTTATGCCTTGAACTCTACACTTCAAATTAAGGATGTTACTTTGTCATATTGTACAAAGTTGTATGACATGTCTTTTGTTCCGGAAAGTGTTATTTTTAGCAATGAAGATCAACTTGTTTTAGGCTGGGATACAAGTTGTGGCAATGAAAATGAAACAGAAAATGAATGTTCTAACATTGTTTCCAAATCAAAAGGTGCAAGGAAAAAGGAAGCCATCCTAGTACCAATAGTATCATGTTTTGGAATTTTATTATTAGTGACCGTATTATATCATATCCGATACACAACTCaaaaagacaaagaaaatgaagcaagaatagaaaaaTTCTTAGAGGATTACAAAGCATTGAAAccaacaaggtattcctattcagacataaagagaatcacaaacaatttcaagaacgaacttggacaaggagcatatggaacagtgtacaaaggtaaattatctagtgacatatatgttgctgtcaagcttctcaaaacatccacaggaaatggaccagaattcatcaatgaagttggaacaatgagtcaaattcatcatgttaatgttgttcacttagttggattttgtgcagacgggcacacacgtgctttggtgtacgagtatttaccaaatggttcgttgcagaaattcatttccaccacagatttcaaaaaccattttttgagttgggataagttacgagaaatcgcgcttggtatagcgaaagggattgagtatcttcatcaaggatgtgaccagaggatacttcactttgatataaaaccgcataatattttgcttgacaataacttcactcctaagatatctgattttggtctggctaagctttgttcgaaggatcaaagtgcggtttccatgacggccgcgagggggactattggttacatagcgcccgaagttttttctaggaactttgggaatgtttcgtataagtcagatgtttatagttttggaatgttgttgcttgagatggtcgggggaagaCAAAATGTTGATGTTGTGGAGAAGAGAAGTGGTTTAGGGTATTTTCCGGAATGGATTTATAATTTGTTGGAGCAAGGGGATGATTTGAGAGAACACATTGAAGTCGAGAAATACGCGAAAATAGCGAAAAAGCTTGCGATTGCGGGACTTTGGTGTATTCAATGGCACCCGATAGATCGTCCTTCTATGCAAGTTGTTGTTCATATGTTGGAAGGAGATGGAGATAAGTTAAGTATGCCACCTAATCCATTTGCTTCAGCTGATCCTGCTATAATGAATGTTAGTGTGATTGGAAGACAACTTCATAGAGATTAA 1788 0.2013 MWGNYSRLIFLPFFCFLLSVNYYTNLALANIQCMKTRCNHNDAPTIQYPFKLQNIQPQNCGKIGFDLSCNENHQTILELPISINFVVKKIDYKSQEIHVTDPNECIPRLISHLNISSTPFHFIDNSNSNFTFFNCSSMNTALQSHYSSIKCLSSHGYHVYALNSTLQIKDVTLSYCTKLYDMSFVPESVIFSNEDQLVLGWDTSCGNENETENECSNIVSKSKGARKKEAILVPIVSCFGILLLVTVLYHIRYTTQKDKENEARIEKFLEDYKALKPTRYSYSDIKRITNNFKNELGQGAYGTVYKGKLSSDIYVAVKLLKTSTGNGPEFINEVGTMSQIHHVNVVHLVGFCADGHTRALVYEYLPNGSLQKFISTTDFKNHFLSWDKLREIALGIAKGIEYLHQGCDQRILHFDIKPHNILLDNNFTPKISDFGLAKLCSKDQSAVSMTAARGTIGYIAPEVFSRNFGNVSYKSDVYSFGMLLLEMVGGRQNVDVVEKRSGLGYFPEWIYNLLEQGDDLREHIEVEKYAKIAKKLAIAGLWCIQWHPIDRPSMQVVVHMLEGDGDKLSMPPNPFASADPAIMNVSVIGRQLHRD 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02974 595 Pfam Protein kinase domain 293 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02974 595 ProSitePatterns Protein kinases ATP-binding region signature. 296 318 IPR017441 GO:0005524
Car04g02974 595 SUPERFAMILY Protein kinase-like (PK-like) 274 562 IPR011009 -
Car04g02974 595 Gene3D Phosphorylase Kinase; domain 1 263 364 - -
Car04g02974 595 ProSiteProfiles Protein kinase domain profile. 290 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02974 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Car04g02974 595 PANTHER RUST RESISTANCE KINASE LR10-RELATED 27 591 IPR045874 GO:0004672
Car04g02974 595 Pfam Wall-associated receptor kinase galacturonan-binding 33 101 IPR025287 GO:0030247
Car04g02974 595 SMART serkin_6 290 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02974 595 Gene3D Transferase(Phosphotransferase) domain 1 365 569 - -
Car04g02974 595 PANTHER RECEPTOR-LIKE KINASE 27 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02974 Car-Chr4 57080630 57083264 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02974 208 581 Receptor kinase-like Gene Family AT1G66910 47.396 4.86e-111 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Car04g02974 Pkinase 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02974 - - zju:107414589 670.233