Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02968 ATGTCTCTTTTTGTTTCAGGAGTAGGCAATGAGAATTTGAGGCTGCAGTTATGGGTACTACTCAGCAAGAGAAGTTTGTTAGGTTTCGGGATTCTAATTTGGAGAAGGTTTCTGAGAGAAAATATCCTGCGTTTAAGACCACAGTCAGGGAGATTTAGAAGTACAATAAGTTCATTTTCTGAGAAGTTTCAAAGGGGATTTGAATCTAGTTCTGAGAGGATAAAGAGGTTCAGAACAACGTTCGACTCTTTTTCGCATAACAGTGCTCTTTCTAGAAACTTTGGTTCTCAAAGGAAAATCCTTGATCCACAGGGTCCATTCCTTCAAAAGTGGAACAAGATATTTGTTTTGTTATGTATTATTGCTGTATCTCTGGATCCTTTGTTCTTTTATGTCCCTGTGATTGATGGTGAGAAGAAATGCCTTACATTGGACAGAGGGATGGAGATTACAGCGACTTTTTTGAGAACTTTCTCCGATGCTTTTTATATAATCCACATGATTTTCCAGTTTCGTACTGGATTCATTGCTCCCTCTTCTCGAGTATTTGGAAGAGGTGTCTTGGTCGAAGATTCTTGGGAAATTGCTAAGAAGTATCTGTCATCATATTTCTTAGTTGACATTCTTGCGGTTCTTCCCCTCCCACAGGTGGTGATTCTTATTATCATCCCGAAGATGAGTGGCTTTAAATCACTAAATACAAAGAACTTGCTGAAATTTGTTGTTTTCTTTCAATATGTGCCTCGTGTGTTGCGAATAATCCCATTATATAAAGAAGTTACAAGGACCTCTGGCATTCTCACTGAAACAGCTTGGGCTGGAGCAGCATTTAATCTCTTTCTTTACATGCTTGCAAGTCATGTCCTTGGTGCCTTCTGGTACTTGTTCTCTATAGAACGAGAAACCACGTGCTGGCAAGAAGCATGTCGAAGTAATATTATGTGTAACAAGGCAGATATGTATTGTAATGATCACCGGGACGGGTTTAAGTCAATTTCTTCATTCTTGAATACTTCTTGCCCAATACAGGAGGAAGATAAAAAGCTATTTGATTTTGGAATTTTTCTCGATGCCCTTCAATCTGGCGTTGTGGAGTCGAGAGATTTTCCACAAAAACTCTTTTACTGTTTTTGGTGGGGCCTAAAAAATTTGAGTTCTCTCGGTCAGAACCTGGCAACAAGCACCGATTTTTGGGAAATCTGTTTTGCTGTTTCCATTTCGATAGCTGGTTTGGTTTTATTTTCATTCCTCATTGGAAATATGCAGACATATTTACAATCAACAACGACAAGATTGGAGGAGATGAGAGTAAAAAGGAGGGATGCAGAACAGTGGATGTCTCATCGATTGCTTCCCGACAGTCTGAGAGAGCGAATCAGGCGATATGATCAGTACAAATGGCAAGAAACCAGAGGTGTAGATGAAGACAGTTTGATTCATGATCTTCCCAAAGATTTAAGAAGGGACATTAAGCGTCACCTTTGCTTGGATTTGCTAATGAGAGTGCCAATGTTTGAGAAAATGGATGAACAACTCTTGGATGCAATGTGTGACCGTCTCAAGCCAGTACTTTACACAGAACAAAGCTACGTCGTCCGGGAAGGAGATCCTGTTGATGAGATGCTTTTCATAATGCGAGGCAAGCTATTGACCATGACAACTAATGGTGGAAGAACCGGCTTCTTCAACTCTGAGTACTTAAAAGCCGGCGACTTTTGTGGAGAGGAGCTTCTCACATGGGCCTTAGATCCTCATTCCTCATCCAACCTTCCCATCTCCACTAGGACGGTCCAAACCATTGTAGAAGTTGAAGCCTTTGCGCTAAAAGCTGACGATCTGAAGTTTGTGGCCTCTCAGTTCCGGCGCCTACACAGCAAGCAGCTGCGCCACACTTTCAGATTCTACTCGCAACAATGGCGAACATGGGCAGCATGTTTCATACAAGCTGCATGGAGACGCTACAGCAAGAAGAAGCTTGAAGAGTCTCTTGTCGAAGAGGAGAACCGACTAAAAGATGCATTGGCAAAGGCTGGTGGTAGCTCAACAAGTTTAGGTGCCACAATATATGCTTCAAGGTTTGCAGCCAATGCACTCAGATTATTGCGGCGTAGTGGCACTGCAAGGAAGATAAGGGTGGCGGAGAGATCAATACCCCCTATGCTACTTCAGAAGCCTGCGGAGCCTGATTTTACTGTTGAAGATCAATAG 2208 0.4212 MSLFVSGVGNENLRLQLWVLLSKRSLLGFGILIWRRFLRENILRLRPQSGRFRSTISSFSEKFQRGFESSSERIKRFRTTFDSFSHNSALSRNFGSQRKILDPQGPFLQKWNKIFVLLCIIAVSLDPLFFYVPVIDGEKKCLTLDRGMEITATFLRTFSDAFYIIHMIFQFRTGFIAPSSRVFGRGVLVEDSWEIAKKYLSSYFLVDILAVLPLPQVVILIIIPKMSGFKSLNTKNLLKFVVFFQYVPRVLRIIPLYKEVTRTSGILTETAWAGAAFNLFLYMLASHVLGAFWYLFSIERETTCWQEACRSNIMCNKADMYCNDHRDGFKSISSFLNTSCPIQEEDKKLFDFGIFLDALQSGVVESRDFPQKLFYCFWWGLKNLSSLGQNLATSTDFWEICFAVSISIAGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPDSLRERIRRYDQYKWQETRGVDEDSLIHDLPKDLRRDIKRHLCLDLLMRVPMFEKMDEQLLDAMCDRLKPVLYTEQSYVVREGDPVDEMLFIMRGKLLTMTTNGGRTGFFNSEYLKAGDFCGEELLTWALDPHSSSNLPISTRTVQTIVEVEAFALKADDLKFVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYSKKKLEESLVEEENRLKDALAKAGGSSTSLGATIYASRFAANALRLLRRSGTARKIRVAERSIPPMLLQKPAEPDFTVEDQ 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02968 735 CDD CAP_ED 504 635 IPR000595 -
Car04g02968 735 Gene3D Helix hairpin bin 430 495 - -
Car04g02968 735 ProSiteProfiles cAMP/cGMP binding motif profile. 504 588 IPR000595 -
Car04g02968 735 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 47 733 - -
Car04g02968 735 Pfam Ion transport protein 111 431 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car04g02968 735 Gene3D Jelly Rolls 502 622 IPR014710 -
Car04g02968 735 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 47 733 - -
Car04g02968 735 SUPERFAMILY Voltage-gated potassium channels 102 426 - -
Car04g02968 735 SUPERFAMILY cAMP-binding domain-like 433 626 IPR018490 -
Car04g02968 735 SMART cnmp_10 504 635 IPR000595 -
Car04g02968 735 Coils Coil 656 676 - -
Car04g02968 735 Gene3D - 109 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02968 Car-Chr4 57010711 57015535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02968 48 734 Ion Channels AT5G53130 79.971 0.0 1118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02968 K05391 - gmx:100801032 1179.85