Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02967 ATGGAGTGCAACAAAGGTGAGGCAGCTAGGGCCAAAGAAATAGCGGAAAGGAAATTTTCTGAAAGGGAATATGCCGGTGCAAAAAAATTTGCTATCAAGGCTCTAAATTTGTATCCTCCACTTGAGGGTCTTTCCCAGCTTCTTGTAACTCTAGATGTTTATATCTCTGCTGAGAATAAAATAAATGGAGAAATGGATTGGTATGGTATACTTGGAGTCAAACCCTTTGCTGATGAAGAGACGGTTAGAAAACAGTACAGAAAGTTGGCTCTCACTCTTCACCCTGACAAAAACAAAACTGTAGGTGCAGAGGGCGCGTTTAAACTCGTTTTAGAGGCCTGGAGTTTACTATCGGATAAGGTCAAGAGACTAGCGTATAACCAAAACCGGAGTTCAGAAAGATCTCGACATAATGCTCCTAACCATGCTGCGTCTCGATCTGGAGCACCCGGTTCAAATGGCTTTAATGATCTTAACAAGAATGCAGCAACTTCAAATGCAAGAACTGAAAATAGTAATGCTCGGCCACCACCAACCTCTGTTCCTCCTCTGCAGAAAATCAGTGGTACCTTTTGGACTATCTGTAATCAGTGCAGGACACATTATGAATATCAAAGGGTTTATTTGAATCATACCCTTTTATGTCCCAATTGTAAAAAAGCTTTTGTGGCTATAGAGAAGGGTCCACCTGCTCATGCTGTTAAGTCATCTAATGGGTCTTCTCGGCAACATCATCAGAAGGTTCGACATCATACTGGAAGGAGTCAACCTGTAACCGGCTCAACTTGTTTTAATAAGACAAACATTCAGTCAGGTCCTCACTCAAGAATGCCTGGTTTTGGTAGTGCAGGAGGATCGTCATCTATTGCTGATGTAAGTGTTAAGCAGCATTCAGGTGTGAAAAGAGAATTCGAGGGAGTCGCGTCAAGTGCTACATGGGAGAAGAATCTCACGAATAAGGGGTCCGGTGGTTCTTTTAGTAATATTGAAAACCCTATGAAGAAATTTAGGAAAGATGATATTCGCATGCACATGATGACCAAGGGAGATGGAGCAGCCGGTTTTGGCCGCGTTTATGAATCCGGAAAGACAAATAACTTGGGAACAGAAAGGGTGAGTAAGCACTACAGCACTAGAGAGTTGTCATTGTTCGAACTACGAAACATGTTGATCGATAAAGCAAAGAGAGAAATTTGCAAAAAAATTCAAGAATGGAGATCAATGGCTGAAGCTAAGGTTACAAACAAGGACAAAGGAAACAAGAGGCGAAAAAATGCCATCGGTGACAAAAGAACTGGTTCAGAGAAGCATAGAGGTTCTGCTATAAATGGTAAAAGTGATTCTATTCCAGTCGCATCTGATGACACTCTGAAGGAGAATGATGCAATCAGTGTTCCTGATCCCGATTTTCACAATTTTGATATGGATAGGGCCGAAAATTCCTTTGAGGCCGACCAGGTCTGGGCTGCTTATGATGAAGATGATGGAATGCCTCGATATTATGCAAGAATTCACAAGGACTGGCAAGCACGAAACAACTGA 1542 0.4209 MECNKGEAARAKEIAERKFSEREYAGAKKFAIKALNLYPPLEGLSQLLVTLDVYISAENKINGEMDWYGILGVKPFADEETVRKQYRKLALTLHPDKNKTVGAEGAFKLVLEAWSLLSDKVKRLAYNQNRSSERSRHNAPNHAASRSGAPGSNGFNDLNKNAATSNARTENSNARPPPTSVPPLQKISGTFWTICNQCRTHYEYQRVYLNHTLLCPNCKKAFVAIEKGPPAHAVKSSNGSSRQHHQKVRHHTGRSQPVTGSTCFNKTNIQSGPHSRMPGFGSAGGSSSIADVSVKQHSGVKREFEGVASSATWEKNLTNKGSGGSFSNIENPMKKFRKDDIRMHMMTKGDGAAGFGRVYESGKTNNLGTERVSKHYSTRELSLFELRNMLIDKAKREICKKIQEWRSMAEAKVTNKDKGNKRRKNAIGDKRTGSEKHRGSAINGKSDSIPVASDDTLKENDAISVPDPDFHNFDMDRAENSFEADQVWAAYDEDDGMPRYYARIHKDWQARNN 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02967 513 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Car04g02967 513 MobiDBLite consensus disorder prediction 413 453 - -
Car04g02967 513 PRINTS DnaJ domain signature 68 86 IPR001623 -
Car04g02967 513 PRINTS DnaJ domain signature 86 101 IPR001623 -
Car04g02967 513 PRINTS DnaJ domain signature 102 122 IPR001623 -
Car04g02967 513 MobiDBLite consensus disorder prediction 141 175 - -
Car04g02967 513 MobiDBLite consensus disorder prediction 230 288 - -
Car04g02967 513 SUPERFAMILY Chaperone J-domain 59 129 IPR036869 -
Car04g02967 513 MobiDBLite consensus disorder prediction 413 442 - -
Car04g02967 513 PANTHER BNAC03G44070D PROTEIN 1 506 - -
Car04g02967 513 CDD DnaJ 66 119 IPR001623 -
Car04g02967 513 Gene3D DnaJ domain 63 174 IPR036869 -
Car04g02967 513 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Car04g02967 513 SMART dnaj_3 65 122 IPR001623 -
Car04g02967 513 Pfam Domain of unknown function (DUF3444) 461 506 IPR024593 -
Car04g02967 513 MobiDBLite consensus disorder prediction 253 275 - -
Car04g02967 513 Pfam DnaJ domain 66 127 IPR001623 -
Car04g02967 513 PANTHER HEAT SHOCK PROTEIN-LIKE 1 506 - -
Car04g02967 513 MobiDBLite consensus disorder prediction 128 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02967 Car-Chr4 56986740 56991523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02967 4 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.043 2.19e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02967 - - gmx:100792212 646.736