Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02957 ATGAGCAAGAAGATGTGTCTCTTGTTCATGAACTCAGCAACTTTCATGATTATAGCAGTGTTCTTTGTTTGTGTTAAAGCTGAACCTTTAGCAGATAAACAAGCTTTACTTGATTTCATTCACAATATTAATCACTCTACACATCTCAACTGGGACAAAACCTCTTCTGTATGCAAAAAATGGACTACAGTTATCTGCAACACTGAAAAATCAAGAGTTATAGCACTTCAGTTACACAGTGCTGGATTAAATGGTCAAATCCCACACAACACTCTTAGTAGACTCACAGCACTTCAGAATTTGAGTCTTGCATCAAACAATATAACTGGTTCTTTCCCTTCTGGTTTTTCTGAGCTGAAAAATTTGACATTTTTATTCCTTCAATTTAACAAGTTTTCTGGTCCTTTGCCGTTCGATTTTGCGGTTTGGAGTAATCTTACTGTTGTGAATTTGTCCAACAATTCTTTTAATGGAAGCATCCCTTTATCAGTTACCAATTTGACTCATCTCAGTTCTTTAGTCCTTGCCAATAATACTCTTTCAGGTGAAATTCCTGATATCAATATTCCTAGTTTAAAATATCTCAATTTGGTTAACAATAAACTTAGTGGTGTTGTGCCTAAATCACTTTCTAGATTTCCAAGTTGGTGTTTTTCAGGTAATAATAATCTTACATTTGTTAATGCATATCCTGTTAAATCTCCAAATTCTCATAAGAAAAGGAAAACCAAAGGACTTAAGCCTGCATTATTAGGTATCATCATTGGTGGTTGTGTGGTAGGACTTGTAGTCATAGTAGTTTTCTTGATTGTATGCTGCTACGAGAAATGCGGTGAAGATCGACAACTGATTAAGTCTCAGAAGAATAAAGAAGTTTCTGAGAAAAAAGAAGCTTCCGAGAGTCGAGAAAGAAACAAGATCGTCTTCTTCGAAGGCTGCAATCTTGTTTTTGACTTGGAAGATTTGTTGAGAGCTTCTGCTGAGGTGCTTGGAAAGGGAACATTTGGTACAGTTTATAAGGCTGCTTTAGAGGAGTCGACAACGGTCGCGGTTAAGAGGTTGAAGGAAGTCGCGGTTGGGAGACGCGAGTTTGAACAGCAGATGGAGATGGTTGGGAGGATTAGGCATGAGAATGTGGCTGCACTAAGAGCATATTACTATTCAAAGGAGGAGAAACTTATGGTATATGATTATTTTGAACAGGGCAGTGTCTCAACAATGTTGCATGGCAAAAGAGGGGTAGAAAAGATTTCATTAGACTGGGAAAGCAGGTTAAGAATAGCAATTGGTGTAGCAAGAGGCATATCTCACATCCATGCTCAAAATGGAGGAAAACTAATCCATGGAAACATAAAAGCCTCAAACATCTTCCTCAACTCCCAAGGATATGGTTGTATATCTGACATTGGTCTAACAACAATGACAAGTCCAATAACCCCACCAACATTGAGAACTACAGGATACCTTGCACCGGAAGTAACCGACGCTCGAAAAGCAACGCCGGCATCCGATGTCTATAGTTTTGGTGTCTTGTTACTTGAACTTCTAACAGGAAAATCTCCCTTACTTGGAAGTGAGGAAGTTGTTCATTTGGTTAGATGGGTGAATTCTGTGGTTAGAGAAGAGTGGACAGCTGAAGTTTTTGATGTTGAGTTATTGAGATATCCTAATATAGAAGAAGAAATGGTTGAGATGTTACAAATTGGAATGGCATGTGTTGTGATGATACAAGATCAAAGACCAAATATGGATGAAGTTGTGAAAATGGTTGAAGGAATTAGTAGGGTTAATAGTGGAAATAGACCATCTACTGAATCTAGATCAGAAAATTCTACTCCAACTCCTCATGCAATTGATACACCTTCTAATTCTCTTCCACTTTGA 1884 0.379 MSKKMCLLFMNSATFMIIAVFFVCVKAEPLADKQALLDFIHNINHSTHLNWDKTSSVCKKWTTVICNTEKSRVIALQLHSAGLNGQIPHNTLSRLTALQNLSLASNNITGSFPSGFSELKNLTFLFLQFNKFSGPLPFDFAVWSNLTVVNLSNNSFNGSIPLSVTNLTHLSSLVLANNTLSGEIPDINIPSLKYLNLVNNKLSGVVPKSLSRFPSWCFSGNNNLTFVNAYPVKSPNSHKKRKTKGLKPALLGIIIGGCVVGLVVIVVFLIVCCYEKCGEDRQLIKSQKNKEVSEKKEASESRERNKIVFFEGCNLVFDLEDLLRASAEVLGKGTFGTVYKAALEESTTVAVKRLKEVAVGRREFEQQMEMVGRIRHENVAALRAYYYSKEEKLMVYDYFEQGSVSTMLHGKRGVEKISLDWESRLRIAIGVARGISHIHAQNGGKLIHGNIKASNIFLNSQGYGCISDIGLTTMTSPITPPTLRTTGYLAPEVTDARKATPASDVYSFGVLLLELLTGKSPLLGSEEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIGMACVVMIQDQRPNMDEVVKMVEGISRVNSGNRPSTESRSENSTPTPHAIDTPSNSLPL 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02957 627 Gene3D Ribonuclease Inhibitor 31 139 IPR032675 -
Car04g02957 627 SUPERFAMILY Protein kinase-like (PK-like) 328 591 IPR011009 -
Car04g02957 627 PANTHER OS05G0588300 PROTEIN 17 620 - -
Car04g02957 627 ProSiteProfiles Protein kinase domain profile. 324 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02957 627 Gene3D Ribonuclease Inhibitor 140 241 IPR032675 -
Car04g02957 627 Gene3D Transferase(Phosphotransferase) domain 1 399 612 - -
Car04g02957 627 MobiDBLite consensus disorder prediction 596 627 - -
Car04g02957 627 Pfam Protein tyrosine and serine/threonine kinase 328 588 IPR001245 GO:0004672|GO:0006468
Car04g02957 627 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Car04g02957 627 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Car04g02957 627 PANTHER LRR RECEPTOR-LIKE KINASE 17 620 - -
Car04g02957 627 SUPERFAMILY L domain-like 44 222 - -
Car04g02957 627 Gene3D Phosphorylase Kinase; domain 1 288 398 - -
Car04g02957 627 MobiDBLite consensus disorder prediction 594 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02957 Car-Chr4 56816763 56820879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02957 27 618 Receptor kinase-like Gene Family AT4G23740 55.122 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car04g02957 PK_Tyr_Ser-Thr 9.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02957 - - aprc:113851984 858.981