Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02951 ATGGAGCATGGAAGCCCCTCCTCTAACCATAGCCGTAAGGCACAATCAAGCTCTGATACTCGGAAGGAAGGGAAGAATGGTGCAGGAAGTGAGGAAGTGCATATGCCAATCGCAAATTTGGCAAAAATCATGAGGCGTGCTCTTCCCGCTCAGGTAAAAATATCTGATGGTGCTAAGGAATCAATGCAATTGTGTGTCTCTGAATTCATGGGCATTATCACTACTGAGGCTAGCCAGCGTTGCAAAGTTGAGCATCGCAAAATTGTTACCGCTGAAGATTTAATTTGGGCTATGGATAGGTTGGGCTTTGAGGACTATACTGCCCCTCTTGTTCTTTACCTTGATAACTATCGTAAAAATGAGGCCCAGATTACTGCCATGGCAATTGCCCATGGGCTTAACAAGGATGCATCCAGCAGTGGCAGTGGCAATGACCAACCTTGA 444 0.4617 MEHGSPSSNHSRKAQSSSDTRKEGKNGAGSEEVHMPIANLAKIMRRALPAQVKISDGAKESMQLCVSEFMGIITTEASQRCKVEHRKIVTAEDLIWAMDRLGFEDYTAPLVLYLDNYRKNEAQITAMAIAHGLNKDASSSGSGNDQP 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02951 147 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 9 128 IPR027113 GO:0001228|GO:0006355|GO:0016602
Car04g02951 147 MobiDBLite consensus disorder prediction 15 29 - -
Car04g02951 147 Gene3D Histone, subunit A 20 146 IPR009072 GO:0046982
Car04g02951 147 PRINTS CCAAT-binding transcription factor subunit A signature 62 80 - -
Car04g02951 147 PRINTS CCAAT-binding transcription factor subunit A signature 81 99 - -
Car04g02951 147 PRINTS CCAAT-binding transcription factor subunit A signature 100 118 - -
Car04g02951 147 MobiDBLite consensus disorder prediction 1 32 - -
Car04g02951 147 SUPERFAMILY Histone-fold 31 124 IPR009072 GO:0046982
Car04g02951 147 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 35 98 IPR003958 -
Car04g02951 147 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 9 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02951 Car-Chr4 56747504 56749585 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02951 35 123 CCAAT-HAP3 Transcription Factor Family AT5G47670 58.427 1.05e-35 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Car04g02951 CBFD_NFYB_HMF 3.8e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02951 K08065 - tcc:18593281 121.709