Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02941 ATGGTGCCTCCGGGGCCACCCACTCCGATTGGTGGTGCCCAGTCAGTGTCGCCTTCGCTAATGAGATCGAATTCGGGGATGATGGGAGGTCAAGGTGGTCCCATGCCTTCACAAGCTTCTTTTCCTGCATTGGTTTCGCAGCGAAATCAGTATAATAACATGAACATGTTAGGCAACATGTCTAATGTTGCTTCCATGATGAATCAGTCTTTTTCTAATGGGATTCCGAACTCAGGACTTTCGGGAATGGGAAGTAATCAGAGGGGAGGTGCTGGTATGGATGCTAGTGCTGAACAGGACCCGCTATCTGGTATCAGCAATGGAATGGGATTTGGTAATCCTTCGTCGGCGTTTGGGCAATCGAATGTGTCTAACCCTAGCTCATCTGGTCAAGGCCAGGGTCAGCAATTTTCGAACCCTTCTGGTAACCAGTTGTTGTCGGATCAACAGCATTCTCAACAACTCGAAGTTCAGAATTTCCAACATAGTCAGCAGCAGTCGGGGCAGCAGTTTTCGGCTCCGCTGAACACTcaacaacagcagcagcagcagcaTTTTCAATCAATGCGAGGTGGGATAGGTGGTATTGGACATGTGAAAATGGAGCCACAGGTAAACAACGATCAGTTCGGGCAGCAGCAGTTGCCATCGCTGAGGAATCTTGCTCAAGTGAAATTGGAACCACAACAACTTCAAACAATGAGAGGTATGGCGCCGGTAAAAATGGAGCCACAGCATACTGATCAGCCATTTTTgcatcaacaacagcaacagcaacagcagcagcaacaacTTCTCCATATGTCAAGGCAAACCTCTCAGGCTACTGCTGCACAGATGAATCTTTTGCAACAACAGAGACTAATgcaatatcaacagcagcagcaactcttaaaggcaatgcctcagcaacggtcccagctaccgcagcagtttcaacagcaGAATATGCCTATAAGGTCTCCTGCGAAACCAGCATATGAACCTGGGATGTGTGCTAGGCGGTTGACTCATTACATGTATCAGCAACAACATAGACCTGAAGATAACAATATTGATTTCTGGAGGAAATTTGTTGCCGAGTATTTTGCTCCTAATGCTAAAAAGAAGTGGTGTGTTTCCATGTATGGAAGTGGCAGACAAACAACTGGAGTTTTCCCTCAGGATATATGGCACTGTGAAATATGTAATCGCAAACCTGGCCGCGGGTTTGAGGCAACTGCTGAGGTTCTTCCCAGGCTTTTCAAAATTAAGTATGAAAGTGGTACTTTAGAAGAGCTACTGTATGTTGACATGCCTCGTGAATATCATAATTCCTCTGGCCAGATTGTTCTAGATTATGCAAAAGCAATACAAGAAAGTGTTTTTGAGCAACTTCGCGTTGTTCGTGATGGTCAACTTCGAATAGTTTTTTCTCCAGACCTGAAGATATGCTCCTGGGAATTTTGTGCTCGGCGTCATGAAGAGCTCATCCCCAGAAGATTGTTGATACCACAGGTTAGTCAGCTTGGAGCAGTTGCTCAAAAATATCAGGCATGTACTCAAAATGCAGCACCCAATCTATCCATTCCAGAGTTACAAAATAATTGCAATTTGTTTGTTTCATCAGCCCGTCAGCTGGCAAAAGCATTAGAAGTTCCATTGGTTAATGATTTAGGATATACAAAGAGATATGTGCGGTGCCTACAAATATCTGAAGTGGTAAATAGTATGAAAGACTTGATAGATTATAGCAGAGAAACAGGGACTGGACCTATGAACAGCTTAGCCAAGTTCCCTCGGAGAACAAGTAATTCATCCGCACTTCATAGTCAGGCGCAACAGTCTGAAGATCAATTACAGCAGCAACAACAGCATATGGTGGCCCATAATTCAAACGGTGATCAAAACCCTGTGCAATCTGCTGCCATGCAAATTCCTTCCAACAATGGTGTGCCTAGTGTAAATAACAATGTCAATTCAGCATCTGCATCGACCACCACAAGCACCATTGTTGGACTTCTCCACCAGAACTCTATGAGTGCTAGACAGCAAAATTCAATAAACAACGCCAGCAGTCCATATGGAGGTAGTTCTGCCCATATTCCATCCCCCGGTTCTTGCAATACAGTGCCACAAGGGCAACCAAACTCATCCCCTTTTCATTCACCAACACCGTCCTCATCTAACAACAACCCACAAACTTCTCACCCAGGCATAACATCTGCAAATCACATGGGTACAGCAAACTCACCAGCTAATGTTTCCTTGCAACAACAACAGACATCTATTTCTGGGGAAGCCGACCCTAGTAGTGATGCTCAGAACTCGGTCCAGAAAATCTTTCATGAGATGATGATGTCCTCCCAGATGAACGGTGCAGGTGGAATGGTTGGCCCTAATTCTCTTGGAAATGACATGAAGAATGTAAATGGTATCCTACCAGTGAGTACTAATACAGGCCTCAACAGTGGCAATGGCCTGATGAGTAATGGAGGCGTGAACAGTAATTCTGGCGTTGGGATTGGTGGTTATGGCACAATGGGTCTCGGTCCATCTGGTTTACCCAATGGAATGAGACCTGCAACAGGAAATAATTCAGTCATGAATGGGAGGGGAGGAATGGCATCAATCACTCGGGAACAGGCTATGAATCATCAACAAGATTTGTCAAGCCAACTACTTAGTGGCATGAGGAGTGCTAGATCTGCTTTCAGCACCCTGATGATGGCAGAATTCAGTCGGGTAGTCATAGGACTTGATTCCGGCGCGATTTGCGGCCGCAACAGCCGCCACCGCAGAAGGCAACGCACCGTGATTCAGCGGTTGCACACTAAAGTGGACCTCCTCTCTGGTTTTCTTTTCTCTGCATCTCTACTTTGCTGCCACCAAAACAAGCTGTCCCTGAAGCAAGTTCCAGGTAGCACTGGCGAGAATGGAATCCCTGGAGAGTAA 2934 0.4349 MVPPGPPTPIGGAQSVSPSLMRSNSGMMGGQGGPMPSQASFPALVSQRNQYNNMNMLGNMSNVASMMNQSFSNGIPNSGLSGMGSNQRGGAGMDASAEQDPLSGISNGMGFGNPSSAFGQSNVSNPSSSGQGQGQQFSNPSGNQLLSDQQHSQQLEVQNFQHSQQQSGQQFSAPLNTQQQQQQQHFQSMRGGIGGIGHVKMEPQVNNDQFGQQQLPSLRNLAQVKLEPQQLQTMRGMAPVKMEPQHTDQPFLHQQQQQQQQQQQLLHMSRQTSQATAAQMNLLQQQRLMQYQQQQQLLKAMPQQRSQLPQQFQQQNMPIRSPAKPAYEPGMCARRLTHYMYQQQHRPEDNNIDFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDIWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQACTQNAAPNLSIPELQNNCNLFVSSARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMNSLAKFPRRTSNSSALHSQAQQSEDQLQQQQQHMVAHNSNGDQNPVQSAAMQIPSNNGVPSVNNNVNSASASTTTSTIVGLLHQNSMSARQQNSINNASSPYGGSSAHIPSPGSCNTVPQGQPNSSPFHSPTPSSSNNNPQTSHPGITSANHMGTANSPANVSLQQQQTSISGEADPSSDAQNSVQKIFHEMMMSSQMNGAGGMVGPNSLGNDMKNVNGILPVSTNTGLNSGNGLMSNGGVNSNSGVGIGGYGTMGLGPSGLPNGMRPATGNNSVMNGRGGMASITREQAMNHQQDLSSQLLSGMRSARSAFSTLMMAEFSRVVIGLDSGAICGRNSRHRRRQRTVIQRLHTKVDLLSGFLFSASLLCCHQNKLSLKQVPGSTGENGIPGE 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02941 977 Coils Coil 606 626 - -
Car04g02941 977 MobiDBLite consensus disorder prediction 1 40 - -
Car04g02941 977 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 901 - -
Car04g02941 977 MobiDBLite consensus disorder prediction 581 656 - -
Car04g02941 977 MobiDBLite consensus disorder prediction 680 768 - -
Car04g02941 977 PANTHER LIM DOMAIN-BINDING PROTEIN 1 901 IPR029005 -
Car04g02941 977 MobiDBLite consensus disorder prediction 75 192 - -
Car04g02941 977 Pfam LIM-domain binding protein 335 589 IPR029005 -
Car04g02941 977 MobiDBLite consensus disorder prediction 100 189 - -
Car04g02941 977 MobiDBLite consensus disorder prediction 579 656 - -
Car04g02941 977 MobiDBLite consensus disorder prediction 12 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02941 Car-Chr4 56599131 56611048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02941 1 807 C2H2 Transcription Factor Family AT1G43850 61.972 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02941 - - gmx:100798031 1253.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02941 04 56599131 56611048 Car04g02941 04 56599131 56611048 ECH