Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02940 ATGTCTAACAACAAATGCACCAACTTCTACGATATCTATGGACCTGAAGCCAAGGCAGATGTTGTTTTCAAGTCACCAGAAGAAGACAAATCAACTCTGAATCTCGCTGACATTCAAGGACTTGTAACTTGGGTTCTCGGTGAAGGATTCATGCCATCATGGGTTTTTATCAAGAATAAACCTCTAATTTTCAAAGTAGTTATGCTCTATATGCCAGGCCTGGATGCAGCTTTGTTCTTGTCACTGTCCAAAATGCTTCCTAATTTAAAAAAATCATGTGGCAAACCAAGACCAGTCTTTGCTCTCAGCTGTGTATCAGATAGTATGCAGACAATTGATGCACTCCTAACATGCAAGCAGAAAAGAAAAAGGGATCAAAATGGTTCAATTACGACAATATCTACACCGACATCACAACAAGAAGAAGGCTGCAGTGGTACTCTCAGTCTATCATTTACGGAGCTTACTAAAGATATACCGTTCCCTGTTACACACTACACACTATCAAAGAAAGAACTGGTAGAGAATGAATATCCTGTTAATAAGCCAGGTTTTCTTTCTACTCTTCCTGCTCCTCCGGAATCTCCTTTTTATGAGATGTTAGCACTTGACTGTGAGATGTGCATAACAGGTGAGGGGTTTGAGCTTACAAGAGTAACTCTAGTGGATGTCAAAGGACAGGTTTTGTTAGATGAATTGGTTAAACCTTCAAATCCTATCACTGATTACAATACAAGATATAGTGGAATAACGGCTGAGATGTTAGATGGGGTGACAACAAGTCTGTCAGACATTCAGGAAGTGTTTCGAAAATTGGTTCACAAAGAAACTATTCTTGTTGGGCATTCTTTGGAAAATGATTTATTAGCATTGAAGATATCACATGACTTGGTCATTGACACAGCAGTATTATACAAACACCCCCGAGGGAGATCCCATAAAACTGCTCTACGGTTTCTTACTAAAAGATTTCTTTCAAGGGAGATACAGCAATCAGGGAATGGACATGACAGTGTTGAAGATGCTAGAGCTACCATGGAATTGGCATTGACATTTACTCTTGAATCAGGGCCTGGCTTTGGTGCCCCTCCATCCTTTATGCGGGAAAAGCTCCTTTCCATTTTGAGCGAGTATGGCAAAACTTCTTCAATGATTGATGACATATCCATAGTAAGACGATTTGCTTCCGAGACCTCTAATTCAATTCCAGTTACATCTGACGAAGAAGCACTTGCAAAAACTATCAAGGAGGTATTGAAGAATGAAAAGGTGCATTTTATCTGGACTCAATTTTCAGAATTACACTCATACTTGAATAAACAAGCAGAGGATTCAGATAGCTTAAATAAAAAAATTGCAGAGATGATTGCATTACATACATGTCAAAAGAATCATTCAAAAGGGAAAGGCCCCAAGTCAAATACATCTGCTGAACTGAAGGAAGTTGTTGCTCGCATGGATAATAGAATTCATAAACTGTATAAGTCGTTACCAACAAATGCTATGATGATAGTTTGCACCGGTCATGGAGACACAGCAGTTGTCCGCAGGTTGAGGAAAATGCTTAAGGAGGAGAGTGGAAGTAATTTTGGTCGTGACAAAATTGTGGAAGTCTTAGAAGATTTTCAGGCCAGAGCTGAAGTAGCTTTATGTTTTGTAGGTGTAAAGCACTGA 1674 0.3931 MSNNKCTNFYDIYGPEAKADVVFKSPEEDKSTLNLADIQGLVTWVLGEGFMPSWVFIKNKPLIFKVVMLYMPGLDAALFLSLSKMLPNLKKSCGKPRPVFALSCVSDSMQTIDALLTCKQKRKRDQNGSITTISTPTSQQEEGCSGTLSLSFTELTKDIPFPVTHYTLSKKELVENEYPVNKPGFLSTLPAPPESPFYEMLALDCEMCITGEGFELTRVTLVDVKGQVLLDELVKPSNPITDYNTRYSGITAEMLDGVTTSLSDIQEVFRKLVHKETILVGHSLENDLLALKISHDLVIDTAVLYKHPRGRSHKTALRFLTKRFLSREIQQSGNGHDSVEDARATMELALTFTLESGPGFGAPPSFMREKLLSILSEYGKTSSMIDDISIVRRFASETSNSIPVTSDEEALAKTIKEVLKNEKVHFIWTQFSELHSYLNKQAEDSDSLNKKIAEMIALHTCQKNHSKGKGPKSNTSAELKEVVARMDNRIHKLYKSLPTNAMMIVCTGHGDTAVVRRLRKMLKEESGSNFGRDKIVEVLEDFQARAEVALCFVGVKH 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02940 557 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 6 541 - -
Car04g02940 557 Pfam Exonuclease 202 348 IPR013520 -
Car04g02940 557 Gene3D - 198 356 IPR036397 GO:0003676
Car04g02940 557 CDD REX1_like 201 350 IPR034922 -
Car04g02940 557 PANTHER LD29573P 6 541 - -
Car04g02940 557 SMART exoiiiendus 199 358 IPR013520 -
Car04g02940 557 SUPERFAMILY Ribonuclease H-like 200 354 IPR012337 -
Car04g02940 557 SUPERFAMILY Alkaline phosphatase-like 367 512 IPR017850 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02940 201 348 C2H2 Transcription Factor Family AT2G48100 33.742 1.56e-09 57.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02940 04 56592247 56599096 Car04g02940 04 56592247 56599096 ECH